| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4652 |
|---|
| Symbol | |
|---|
| ID | 8885857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4959165 |
|---|
| End bp | 4960037 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Xylose isomerase domain-containing protein TIM barrel |
|---|
| Protein accession | YP_003513388 |
|---|
| Protein GI | 291302110 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00059422 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACC CCGTGGGCGT CAACACCTGG GTGTGGACCT CGCCGCTGAC CGACGCCGCC
CTGGCGGAGT TGGCGCCGAG GATCCGCGAC TGGGGATTCG ACGCGGTCGA GTTGCCGGTG
GAGAACCCCG GCGACTTCGA CCCCGGACGT GCCGCCGAGC TTCTGTCCGA ACTGGACCTG
AAGCCGTCGG TGGTGCTGGT GATGGGTCCG GGTCGGGAGC TGGTCGCGGC TCCCGACCCG
GTCATCGAGT CCACCCAGGC ATACCTGCGC CACGTCGCCG ACGTGGCCGC CCGGGTGGGC
TCGCCCGTCA TCGCCGGTCC CGCCTACACC TCGGTGGGCC GGACGTGGCG GCTGTCGGAC
GCCGAACGGC GTGACTGTTA CGCGCTGCTG CGCGACAACC TGCGTCCGGT ACTCGACCAC
GCCGCCCGCC GGGGTGTCAG GCTCGCGGTG GAACCGCTCA ACCGCTACGA GACCAGCCTC
CTCAACACCG TCGAACAGAC CCTGGACGCC CTGGCCGGAC TGCCGGAGGA CCAGTGTGGA
ATCGCGCTGG ACGTGTACCA CCAGAACATC GAGGAACGCG ACATCCCGGC CGCGATCCGC
GCCGCCTCCG GCCGGATCGC CCACGTCCAG GTGTGCGGCA ACGACCGGGG CGCCCCCGGC
GCCGACCACC TCGACTGGCC CGGCATCCTG GCCGCCCTGG CGGACTCCGG TTACACCGGG
CCGTTGATCA TCGAGTCCTT CACCGCCGAC AACGCGACCA TCGCCACCGC CGCCTCGATC
TGGCGGCCAC TGGCGACGAC CCAGGACGAC CTGGCGCGCG AGGGACTGGC GTTCCTGCGC
GCCGCCCAGA CCGAGCAAAA GGACGTGACA TGA
|
|---|
| Protein sequence | MNHPVGVNTW VWTSPLTDAA LAELAPRIRD WGFDAVELPV ENPGDFDPGR AAELLSELDL
KPSVVLVMGP GRELVAAPDP VIESTQAYLR HVADVAARVG SPVIAGPAYT SVGRTWRLSD
AERRDCYALL RDNLRPVLDH AARRGVRLAV EPLNRYETSL LNTVEQTLDA LAGLPEDQCG
IALDVYHQNI EERDIPAAIR AASGRIAHVQ VCGNDRGAPG ADHLDWPGIL AALADSGYTG
PLIIESFTAD NATIATAASI WRPLATTQDD LAREGLAFLR AAQTEQKDVT
|
|---|
| |