Gene Snas_4616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4616 
Symbol 
ID8885821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4923257 
End bp4923835 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513352 
Protein GI291302074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0252967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00238598 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACTTCA ACAGTCACAC CGACGCCGTC GTCGCGGTAT CAGTAGAACT CGTCAACCTA 
CTGACCTCGG GTTACAAGCA AGGACGCCCC TATTCACCCC CACAAGACGA AGACCAAAAA
GTGGCCATCG CCACAGTCCT TTCGGCCCGC AAACGCGACC GCCACCTCCT CACCGCCACC
GAAACCACCG AGATCCAAGC CCTGGCCCAA CGCCTGCGCC CGATCTTCAC CGCAGTCAGC
CTCGCCGACC ACGACGACGC CGCCGAACGC GTCAACGCCC TACTCCGCGA CACCGCCGCC
CACCCCCTGC TCATCAAGCA CGACGGCGAA CCCTGGCACA TCCACTTCCA CGGCGACCGC
GACTCCTACA CCAACGACTG GGCCGCGGGC TGCGCCACCG GCCTGGCCAT CGTCCTGGGC
AGCGAACACG CCGACCGCCT CGGCGAATGC ACCGCACCCG CCTGCGACCG CGTCTTCGTC
GACACCTCCC GCAACGGCAC CCGCCGCTTC TGCTCCACGT CCTGCCAAAA CCGCGTCAAG
ACAGCGGCCT TCCGAGCCCG AGAAAAAGCC CGAAAATAA
 
Protein sequence
MNFNSHTDAV VAVSVELVNL LTSGYKQGRP YSPPQDEDQK VAIATVLSAR KRDRHLLTAT 
ETTEIQALAQ RLRPIFTAVS LADHDDAAER VNALLRDTAA HPLLIKHDGE PWHIHFHGDR
DSYTNDWAAG CATGLAIVLG SEHADRLGEC TAPACDRVFV DTSRNGTRRF CSTSCQNRVK
TAAFRAREKA RK