Gene Snas_4597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4597 
Symbol 
ID8885802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4908592 
End bp4909407 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content64% 
IMG OID 
Productectoine/hydroxyectoine ABC transporter ATP- binding protein 
Protein accessionYP_003513334 
Protein GI291302056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.234171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAGCA GTAACGAAAC CGCCGCGAAG AACGGCACAC CCGCGGTCCG CTTCGAAAAC 
GTCGTCAAGC GTTTCGGCGA CCTGGAAGTC CTCAAGGGAC TCAACTTCAG CGTGCAGCCG
GGCGAGCGCG TGACGCTCAT CGGGCCGTCG GGTTCGGGCA AGACCACCAT CCTGCGGTTG
CTGATGACGC TGGAGAAGAT CACCGACGGC GTGATCTACG TCGAGGGTGA GCCGCTCTCG
CACATGAAGC GCGGCGAAAA ACTCGTCACC GCCAACGAAT CGCACCTGCG GGAAGTCCGC
AAGAAGATCG GCATGGTGTT CCAGCAGTTC AACCTGTTCC CCAACATGAA GGTGCTGCGC
AACATCACCG AGGCGCCGGT GCACACGCTC GGCAAGTCCA AGGACGAGGC GGTCGCCAAG
GCCAAGGAAC TGCTGGACCT GGTCGGTCTG GCCGACAAGG CCGACAACTA CCCGTCGCAG
CTGTCCGGCG GGCAGCAGCA GCGCGTCGCC ATCGCCCGGT CGCTGGCGAT GAACCCCGAC
ATCCTGCTGC TGGACGAGGT CACCTCGGCG CTGGACCCCG AACTGGTCGC CGACGTCCTC
GACCTGTTGA AGGACATCGC CACCACGACC GACATCACGA TGCTCATCGT GACCCACGAG
ATGGGCTTCG CCCGCGACGT CTCGCACCGG GTCATGATGT TCGACCAGGG AGTCATCGTG
GAGGACGGTC CGCCGTCCCA GGTCATGGGC GACCCCGAGC ACGAGCGCAC CCGGGCCTTC
CTCAAGGCGG TCCTGGGTGA GTCCAAACCC GGATAG
 
Protein sequence
MNSSNETAAK NGTPAVRFEN VVKRFGDLEV LKGLNFSVQP GERVTLIGPS GSGKTTILRL 
LMTLEKITDG VIYVEGEPLS HMKRGEKLVT ANESHLREVR KKIGMVFQQF NLFPNMKVLR
NITEAPVHTL GKSKDEAVAK AKELLDLVGL ADKADNYPSQ LSGGQQQRVA IARSLAMNPD
ILLLDEVTSA LDPELVADVL DLLKDIATTT DITMLIVTHE MGFARDVSHR VMMFDQGVIV
EDGPPSQVMG DPEHERTRAF LKAVLGESKP G