Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4597 |
Symbol | |
ID | 8885802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4908592 |
End bp | 4909407 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | ectoine/hydroxyectoine ABC transporter ATP- binding protein |
Protein accession | YP_003513334 |
Protein GI | 291302056 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.234171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAGCA GTAACGAAAC CGCCGCGAAG AACGGCACAC CCGCGGTCCG CTTCGAAAAC GTCGTCAAGC GTTTCGGCGA CCTGGAAGTC CTCAAGGGAC TCAACTTCAG CGTGCAGCCG GGCGAGCGCG TGACGCTCAT CGGGCCGTCG GGTTCGGGCA AGACCACCAT CCTGCGGTTG CTGATGACGC TGGAGAAGAT CACCGACGGC GTGATCTACG TCGAGGGTGA GCCGCTCTCG CACATGAAGC GCGGCGAAAA ACTCGTCACC GCCAACGAAT CGCACCTGCG GGAAGTCCGC AAGAAGATCG GCATGGTGTT CCAGCAGTTC AACCTGTTCC CCAACATGAA GGTGCTGCGC AACATCACCG AGGCGCCGGT GCACACGCTC GGCAAGTCCA AGGACGAGGC GGTCGCCAAG GCCAAGGAAC TGCTGGACCT GGTCGGTCTG GCCGACAAGG CCGACAACTA CCCGTCGCAG CTGTCCGGCG GGCAGCAGCA GCGCGTCGCC ATCGCCCGGT CGCTGGCGAT GAACCCCGAC ATCCTGCTGC TGGACGAGGT CACCTCGGCG CTGGACCCCG AACTGGTCGC CGACGTCCTC GACCTGTTGA AGGACATCGC CACCACGACC GACATCACGA TGCTCATCGT GACCCACGAG ATGGGCTTCG CCCGCGACGT CTCGCACCGG GTCATGATGT TCGACCAGGG AGTCATCGTG GAGGACGGTC CGCCGTCCCA GGTCATGGGC GACCCCGAGC ACGAGCGCAC CCGGGCCTTC CTCAAGGCGG TCCTGGGTGA GTCCAAACCC GGATAG
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Protein sequence | MNSSNETAAK NGTPAVRFEN VVKRFGDLEV LKGLNFSVQP GERVTLIGPS GSGKTTILRL LMTLEKITDG VIYVEGEPLS HMKRGEKLVT ANESHLREVR KKIGMVFQQF NLFPNMKVLR NITEAPVHTL GKSKDEAVAK AKELLDLVGL ADKADNYPSQ LSGGQQQRVA IARSLAMNPD ILLLDEVTSA LDPELVADVL DLLKDIATTT DITMLIVTHE MGFARDVSHR VMMFDQGVIV EDGPPSQVMG DPEHERTRAF LKAVLGESKP G
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