Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4580 |
Symbol | |
ID | 8885785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4886713 |
End bp | 4887324 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_003513317 |
Protein GI | 291302039 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.282947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAGA AGCGCAAAGT CGGCAACCCG CTCGCCCTGG CCGTCCTGTC CTACCTGCTG ATGAAACCGA TGCACCCGTA CGAACTGGGC CGCACGCTCA AGAAACACGG CGACGACCGC AACATCAAGT ACAACCACGG TTCGCTGTAC ATGGTGGTGC GGCAACTGCA CGCCGCCGGG TTCATCGCCG AACAGGAGAT CGAACGGCAG GGCAACCTGC CCGAGCGCAC CGTCTACGCG ATCACCGCCG ACGGGCGCCA GGAACTACGC GACTGGCTGC GCGAGCTCAT CGCCGAGCCG AAGCACGAGT ATCCGGCCTT TGTGACCGGC CTGTCGCTGA TATCCGCGTT GCCTCCCCAG GAGGCGACCG AGCTGCTCCG GAAACGGCTC GAACAACTGG CCGTCCAGCG CGAGGACATC CAATCCGTCC TCGACTCGGC CGCGTCCCAG GGCGTACCCG GCCTGTTCCT CGTCGAAGAG GACTACCGGC TCGCCATTGT GGACACCGAG GTGGACTTCG TCGAGAAGTT CCTCCACGAC ATCAACGACC CCGAAACCGA CTGGGCTGGC CCCTGGGGCG AGTTCCACGA GCAACATACG GAGCAGTCAT GA
|
Protein sequence | MAKKRKVGNP LALAVLSYLL MKPMHPYELG RTLKKHGDDR NIKYNHGSLY MVVRQLHAAG FIAEQEIERQ GNLPERTVYA ITADGRQELR DWLRELIAEP KHEYPAFVTG LSLISALPPQ EATELLRKRL EQLAVQREDI QSVLDSAASQ GVPGLFLVEE DYRLAIVDTE VDFVEKFLHD INDPETDWAG PWGEFHEQHT EQS
|
| |