Gene Snas_4563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4563 
Symbol 
ID8885768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4868548 
End bp4869990 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513300 
Protein GI291302022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.658423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCATG GTCAATTGAC GAGTGATGTA CGCAGGTGGG CGGCGGCGAT CACCCTGGCG 
GGTCTCGTGG CGGCGGCGGT GGCGCTGCCC GCACCCGCTT TCGCCAAGGA CCCCAAACCC
GGCAAGAAAC TGTGCGAGGT GTCGGACGAG GCGCTGGGCG AACTGTCGGG CCTGGTGGCC
ACCGACAACG GTTACGCCGC CATCGGCGAC GGTTCCGACG GCAACGTGAC GACGGTGGAC
GTCATCGCGC TGGACGACAA CTGCGCCAGC ACCGGGCAGA ACATCTCCGG CCAGGTCGAA
CCCTCCGACC CCGAGGACCT CGCCGTCGAC GGCAAGGGCA ACTACTGGGT CGCCGACACC
GGCGACAACG ACGGCGCCCG TCCCAGCATC GCGCTCCACA AGGTCACCCC CGACGCCCAG
GTCTCCACCT ACCGGTTCAC CTATCCGGAC AACGCGGTCG ACTGTGAGGC GCTGCTGATG
CAGCGCGACG GCACCCCGAT CTTCGCCACC AAGGAGCTGG GCGTCTCCAA CCTCTACGCG
CCCGAGGGCG AGCTCGACCC CAACGGCGCC GAGGCGCCGC TGAAGAAGGT CGGCTCGGTC
AAGATCAAGG CCACCAAGAC CAAGGGCGGA CCCGAGGAGA TCAACGGGAT CCCGCTGGGC
GACGCGCCGT CCAGGTTCGT CACCGGCGGC GCGGTGTCGC CGGACGGCAA GAAGGCCGTG
CTGCGCACCT ACACCGACGC CTACGAGTGG AAGGTCGAGG GCTCCGACGT CGCCAAGTCC
ATCAAGGACG GCAAGCCCGC GATCACCCCG CTTCCCGAAG AGCCGCAGGG CGAGGCCATC
ACCTACACCA CCGACGGCAA GAAGTTCGTC ACCGGTTCGG AGATCGGCAG CGGGACGGCG
CCGGCACTGT GGAGCTACAC TCCGGCCAAG GCCGCGTCCG GTTCGGACAA GAAGAAGGAC
GACGAGGCCG CCCCCGAGAA GTCGTTCCTG GACACGATCA TCGACACGCT GGGCCCCAAC
GGGATCCTGT GGGCCGTGGC CGCCGTCGGC GTGATCGGCC TGATCATGGT CATCATCGGC
GGCCGGGTCA TCTGGCGGGC CAGGCGCAAC AAGGCCAACG CGCACTCGCT GAGGGAGTCG
CTCGACAAGG ACCAGCAGGA CGGCTACGAG CGGCCCCGGT ACCGCGACCA GGACGACGGT
TTCGGCGGCG GCAAGCTGTT CGAGCCGGTG TCAGGGCACC GGCAGGACGG CTACCAGGAC
GACTACTACG ACGAACCCCG CAGTGGCTCG GTCTACGGCG GCCATGACGA TCCGCGCAGC
GGCAATGTCT ACGGCGGACA CGACGACCCG CGCAGCGGCA ACGTGTACGG CGGTGGCCGT
CCCGGGCGGG ATCGCCGTGA CGACGAACCC AACTCCGGAA CAGTCTATGG TGGACGGTAC
TGA
 
Protein sequence
MEHGQLTSDV RRWAAAITLA GLVAAAVALP APAFAKDPKP GKKLCEVSDE ALGELSGLVA 
TDNGYAAIGD GSDGNVTTVD VIALDDNCAS TGQNISGQVE PSDPEDLAVD GKGNYWVADT
GDNDGARPSI ALHKVTPDAQ VSTYRFTYPD NAVDCEALLM QRDGTPIFAT KELGVSNLYA
PEGELDPNGA EAPLKKVGSV KIKATKTKGG PEEINGIPLG DAPSRFVTGG AVSPDGKKAV
LRTYTDAYEW KVEGSDVAKS IKDGKPAITP LPEEPQGEAI TYTTDGKKFV TGSEIGSGTA
PALWSYTPAK AASGSDKKKD DEAAPEKSFL DTIIDTLGPN GILWAVAAVG VIGLIMVIIG
GRVIWRARRN KANAHSLRES LDKDQQDGYE RPRYRDQDDG FGGGKLFEPV SGHRQDGYQD
DYYDEPRSGS VYGGHDDPRS GNVYGGHDDP RSGNVYGGGR PGRDRRDDEP NSGTVYGGRY