| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4538 |
|---|
| Symbol | |
|---|
| ID | 8885743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4842209 |
|---|
| End bp | 4843906 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | type III restriction protein res subunit |
|---|
| Protein accession | YP_003513276 |
|---|
| Protein GI | 291301998 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.179492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTGA TCGACCGGGA CTCATTGCCT CCATTGCGGA CCTGGCAGCG CAAGGCCATG
GTCGCGTACC ACCGCAACGC CGCCGAGGAC TTCCTCGCCG TGGCCACCCC CGGAGCCGGG
AAGACCACCT TCGCGCTGCG GATCGCCCTG GACCTGCTGG ACAGCGGCAT CGTGTCGCAG
GTGACGGTCG TGGCACCCAC CGAGCACCTG AAGACACAGT GGTCGCAGGC CGCGGCGAGG
GTGGGCATCA ACCTGGACCC CACCTTCCGC AACGCCGACG TCTTCCTGTC CAACGACTTC
CACGGCGCCG TGGTCACCTA CGCCCAGGTC GGCGCCGACC CGTCGGTCCA CAAACGCCGG
ACCCTGGCCA GGCCCACCCT GGTGATCCTG GACGAGATCC ACCACGCCGG TGACGCCCGC
TCCTGGGGCG AGGGCGTGCA GGCCGCGTTC ACGCCCGCCG TGCGCCGTCT GGCCCTGACC
GGTACCCCGT TCCGCTCCGA CGACAACCCG ATCCCGTTCG TGTCCTACGA GCACGGCGCC
GACGGCAGTC TGCGGTCCCG CCCCGACTCG GTCTACGGCT ACACCCACGC CCTGACCGAC
GGCGTGGTCC GCCCCGTCAT GTTCATCGCC TACTCCGGCC AGGCCCGCTG GCGCTCCAGC
GCGGGCGAGG AGCTGTCGGT GCGGCTGGGC GAACCGCTCA CCAAGGACCT CACCGCGCAG
GCCTGGCGCA CCGCCCTGGA CCCGCTGGGG GAGTGGATCC CGCAGGTGCT GCGGGCCGCC
GACTCGCGCC TCAACGCGCT GCGGGCCGCC GGAATGCCCG ACGCGGGCGG CCTGGTCATC
GCCTCCGACC AGAACTCGGC CCGCGCCTAC TCCAAGATCC TGGGCACCAT CACCGGTGAA
CGTCCCGCCC TGGTCCTTTC CGACGACGCC GGATCCAGCG ACCGGATCGC GAAGTTCACC
GAATCCGACG AACGCTGGAT GATCGCCGTG CGCATGGTCA GCGAGGGTGT CGACATCCCG
CGGCTCGCGG TGGGCGTCTA CGCCACCAAC GCCCACACCC CGCTGTTCTT CGCCCAGGCC
ATCGGACGCT TCGTGCGGTC CCGCCGCCGC GGCGAGACCG CCTCGGTGTT CGTGCCCAGT
GTCGCGCCCA TCCTGGAGCT GGCCGCCCAA CTGGAGGCCG ACCGCGACCA CGTCATCGCC
CCCGAGACCG ACACCGACCC CGAGGACCTG CTCGCCGAGG CGCAGCGCCA ACGCGACGAA
CCCGACGGTC TGCGCGGCGA ACGCGAGACC CTCGCGGCGA CCGCCGAGCT CGACCAGGTC
ATCTTCGACG GGGCCTCCTT CGGCACCCCG ATCCAGCCCG GCTCCCCCGA GGAGGAGGAG
TTCCTCGGCC TGCCGGGCCT GCTCACCCCC GAGCAGGTCT CGATGCTGTT GCAGAAACGC
CAGGCCGACC AACTGTCCAC CGCCCGCCCG GGCGCTCAGG CCAGCGTCAA GACCGAGACC
CGGCCGCTGT CGGCGGCCGA ACGCCGCATC GCGTTGCGCA AGCAGCTCAA CGCCCTGGTT
TCGGCCCAGC ACCACGCCAC CAACGTCCCG CACGGCAAGA TCCACGCCGA ACTGCGCCGC
CGCTGCGGCG GTCCCCCCAG CGCCCAGGCC ACCATCGAAC AACTCGAACA GCGCATCGAG
GCCATCAAGG ACCTCTGA
|
|---|
| Protein sequence | MPVIDRDSLP PLRTWQRKAM VAYHRNAAED FLAVATPGAG KTTFALRIAL DLLDSGIVSQ
VTVVAPTEHL KTQWSQAAAR VGINLDPTFR NADVFLSNDF HGAVVTYAQV GADPSVHKRR
TLARPTLVIL DEIHHAGDAR SWGEGVQAAF TPAVRRLALT GTPFRSDDNP IPFVSYEHGA
DGSLRSRPDS VYGYTHALTD GVVRPVMFIA YSGQARWRSS AGEELSVRLG EPLTKDLTAQ
AWRTALDPLG EWIPQVLRAA DSRLNALRAA GMPDAGGLVI ASDQNSARAY SKILGTITGE
RPALVLSDDA GSSDRIAKFT ESDERWMIAV RMVSEGVDIP RLAVGVYATN AHTPLFFAQA
IGRFVRSRRR GETASVFVPS VAPILELAAQ LEADRDHVIA PETDTDPEDL LAEAQRQRDE
PDGLRGERET LAATAELDQV IFDGASFGTP IQPGSPEEEE FLGLPGLLTP EQVSMLLQKR
QADQLSTARP GAQASVKTET RPLSAAERRI ALRKQLNALV SAQHHATNVP HGKIHAELRR
RCGGPPSAQA TIEQLEQRIE AIKDL
|
|---|
| |