Gene Snas_4512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4512 
Symbol 
ID8885717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4812940 
End bp4813965 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content73% 
IMG OID 
Producttransport system permease protein 
Protein accessionYP_003513250 
Protein GI291301972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.136565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACCAC CCGGAACCCT GCTGCTGCGC GCCCGCGGCG TCTCACTGCT GCTGCCGGTG 
CGGCCGGTAC TGGTCACCGC CGCGTTGTGC CTGGCGCTGT TCGCGTCCTG CGCGCTGTCG
GTGGCCGTCG GCAATGGACA CACCACCGGC ATGCGGGCGG TGGCGGCGCT GTTCACCGCC
GAGGACGTCG GCGCCTGGCG GATCGTCAAC CTGCTGCGGC TGCCGCGATT CGTGGCCGGG
GCGCTGGCGG GCGCGGCCCT GGGCGCCGCC GGTTGCCTGA TCCAGACGCT GGCGCGCAAC
CGGCTGGCCA CCCCGGACCT GGTGGGCGTC ACCGACGGCG CCACCGTCGG GGTGCTGCTG
TCAGTGCTGG GAACTTCCGC CGGAACCCTG GGCGCCTGGT GGGCCGGACC GGCCGGGGCC
ATGGCCGCCG CAGCACTCGT GATGCTGCTG GCGGGCGGCT TGGGCACCAC CGGTTACCGG
ATCCTCGTCG TCGGCGTCGG CCTGTCGGTG GCCATCGACT CGATCACCGA ACTGGTGTTG
GCCCGTCAGA ACCTGCACGC CGCCCAAGGG TTGCTGACCT GGACGCTGGG CTACCTCAAC
GGCCGCGACT ACGCCTCGGC GCTGCCGGTC CTGATCGGAC TGGCGGTGCT GATCCCGGTG
GCGGTGCTGT GTTCGGCGCG GCTGCGGGCG CTGCACTTCG GCGACGACAC CGCGTCCACT
CTGGGGGTGT CACCGGGCGC GACCCGGGCG CTGGCGCTGC TGATCGCGGT GCTGCTGGCC
GGACTGGCCG TCGGGGTCGC CGGACCGATC GCGTTCGTGG CCATGGCCGC GCCGGTGTTG
GCGTCCTATA TGTCCGGACG GTCCCGGGTT CCGGTGCTCG TCGCGGCCCT GGCCGGTGCG
GTGCTGGTCA GCCTCGCCGA CACGCTGGGG CGCGGCCTGG GTGAGGTCGA GATCCCGGTG
GGCGTGCTGA CCAGCCTGCT GGGCGGGCCG TTTCTGTTGT GGGTGCTACT GACCAGGAAG
GTGTAG
 
Protein sequence
MRPPGTLLLR ARGVSLLLPV RPVLVTAALC LALFASCALS VAVGNGHTTG MRAVAALFTA 
EDVGAWRIVN LLRLPRFVAG ALAGAALGAA GCLIQTLARN RLATPDLVGV TDGATVGVLL
SVLGTSAGTL GAWWAGPAGA MAAAALVMLL AGGLGTTGYR ILVVGVGLSV AIDSITELVL
ARQNLHAAQG LLTWTLGYLN GRDYASALPV LIGLAVLIPV AVLCSARLRA LHFGDDTAST
LGVSPGATRA LALLIAVLLA GLAVGVAGPI AFVAMAAPVL ASYMSGRSRV PVLVAALAGA
VLVSLADTLG RGLGEVEIPV GVLTSLLGGP FLLWVLLTRK V