Gene Snas_4420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4420 
Symbol 
ID8885621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4712220 
End bp4713137 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513159 
Protein GI291301881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.597726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGTT GGCGCAAGCG GTCGAAACCG GTCGCGGGCT TGGAGGAGCT GGCGGGGCGG 
TTGCAGGAGC GGGACCGGTT GATCATTGAT GCGTTGGGGC GGTACAAGGT GCTGACCAAA
GCGCAGGTGG CGCGGCTGTT CTTCGACTCC GAATCCTCCG CCCGCGACCG CCTATCCACG
CTGGTGGAGC TGGACGTCAT CACGCGATAC CGTTCGCACA ATCGGCAAGC CTGGCGCTAC
ACCCTCGCGT ATTGGGGTGC CTGCGTTCAT GCTGTCGCGA CCAATCCGGA TGCCAAGACT
CCGACCAAGA AGGCCGTGTT CGATCAAGCG ACGCGGATCA TGCACTCGGC CCACCGCGGC
CACACTGAAT CCACCAACGA CTTCTTCACC CGCCTGACCG CGTGCTGCCG CCACCGCGCC
GACGAGGGGT GGGTGGTGGA GCGGTGGTTG AGTTCGGCTG AGTCCAGCCT GTTCTTCACC
AACACCAAAC CCCGGCCCGA CGGAGGCGCC ACCATCCACA TGGATGACAG GGTGTTGGAA
TTTTGGTTCG AGCACGACAC CGGCACCGAA CCGTTGCATG TCTTGGCCGA CAAGATCGAC
GCCTACGACA AGGAATACGA CCAGCCCTGG CGGGACAACT TCACGCCGGT GCTGCTCCAG
ATTGACAAAC CGGGTCGAGA AACCCATTTC CACCACACCC TCGCCTTGGC ACGTGCTGAA
CGGCCGCTGT CGTTCCCGGT CGCCACCACC ATCACCGAAC TCGCGACCGA CCCTGCCGAT
GCGGTGTGGT GGCTTGTCGG GCACGACGAG GTCCGCGTGC GCCTCGACCA GATTCCGCCC
GCTAAAAAGC GCCTGGACTC ACTAGAGTTC ATGAAATACT GCCGAAGCGA CGACTACCGC
GTCGGCGGCT GGACCTAA
 
Protein sequence
MTSWRKRSKP VAGLEELAGR LQERDRLIID ALGRYKVLTK AQVARLFFDS ESSARDRLST 
LVELDVITRY RSHNRQAWRY TLAYWGACVH AVATNPDAKT PTKKAVFDQA TRIMHSAHRG
HTESTNDFFT RLTACCRHRA DEGWVVERWL SSAESSLFFT NTKPRPDGGA TIHMDDRVLE
FWFEHDTGTE PLHVLADKID AYDKEYDQPW RDNFTPVLLQ IDKPGRETHF HHTLALARAE
RPLSFPVATT ITELATDPAD AVWWLVGHDE VRVRLDQIPP AKKRLDSLEF MKYCRSDDYR
VGGWT