Gene Snas_4379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4379 
Symbol 
ID8885580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4669553 
End bp4670797 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513119 
Protein GI291301841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.791829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATC CCAACGATCC GCGTGTTCAA CAGATGATGG CCCAACTGCA GCACATGATG 
TCGCAGCAGT CCTCCGGGCC GGTCAACTGG GACCTGGCCC GGCAGCTGGC GAATCAGCAG
GTGGGCGAGG ACCCGATGGT CGACTCCCGG TCGCGCACGG CCGGGGACGA GAGCCTGCGA
CTGGCAGACC TGTGGCTGGA GAACGCCACC ACGCTGCCCT CGGGCACGTC CACGACCGTG
GCGTGGACCC GCAAGGACTG GATCGCGCAC ACCGTCGACA CCTGGAAGGA GCTGGCCGAG
CCGCTGGCGG CCCACATGGC CGACGCGCTG CAGGAGCTGG TTCCCGAGGA CATGCGGGCG
ATGCTGGGCC CGATGTCGAG TCTGATGAAG GGCCTGGGTT CGACGCTGTT CGGGGCCCAG
TTGGGACAGG CGATGGCTTC GCTGTCCACT CAGGTGATGA CCTCGACCGA GGTCGGGCTG
CCGCTGGGGC CCGCGGGTAC CGCGGCGCTG ATCCCGGCGA ACCTCGCCGA GTACGCCGAG
GGCCTGGAGG ACATCGACAT CGACGAGGTC CGGCTGTACG TGTCGCTGCG CGAGACGGCG
CACCACCGCC TGTACGGGCA CGTGCCGTGG CTGCGGGCCC ACATCCTGGG CGGCGTCGAG
GCGTACTCGC GCGGCATCCA CATCGACACC TCCGCGATCG AGTCGCTGAC CGGCGATCTG
GACTTCTCCG ACCAGGAGGC GATGCGCAAC GTCGACCTCG GCGAACTGCT GCGCACTTCG
GACACTCCGC AGCAGCAGGC CGCGGTGGCC CGGCTGGAGC ACATGCTCGC GCTGGTGGGC
GGCTGGGTGT CACACGTGGC GGCGCAGGCC GCCGGTGACC GGCTGCCCTC GCTGTCCAAG
CTGACCGAGT CGGCCCGTCG CCGTCGGGCG ACCGGCGGTC CCGCCGAACG CACCTTCGAG
GCACTGGTGG GCATGAAGCT CAGCCCCAAG AAGCTGCGCG AGGCCACGGC GCTGTGGGAG
AAGCTGACCG AGGAGCGGGG CGTGGACGGC CGCGACGCCG TGTGGTCCCA CCCGGACCTG
ATGCCCAGCC CCGAGGACCT GGACGACCCC GACGCCTTCG CGGCCCGCGA ACCCGGCCTG
GGCGACCTCG ACATGTCGAT CTTCGACCAA CTGGCCGTCA ACGACCCGAA ACCTCCACGC
GAGGACGACG ACTCCGACGG CGACCAGGGC AAGAACCCGT CCTGA
 
Protein sequence
MPDPNDPRVQ QMMAQLQHMM SQQSSGPVNW DLARQLANQQ VGEDPMVDSR SRTAGDESLR 
LADLWLENAT TLPSGTSTTV AWTRKDWIAH TVDTWKELAE PLAAHMADAL QELVPEDMRA
MLGPMSSLMK GLGSTLFGAQ LGQAMASLST QVMTSTEVGL PLGPAGTAAL IPANLAEYAE
GLEDIDIDEV RLYVSLRETA HHRLYGHVPW LRAHILGGVE AYSRGIHIDT SAIESLTGDL
DFSDQEAMRN VDLGELLRTS DTPQQQAAVA RLEHMLALVG GWVSHVAAQA AGDRLPSLSK
LTESARRRRA TGGPAERTFE ALVGMKLSPK KLREATALWE KLTEERGVDG RDAVWSHPDL
MPSPEDLDDP DAFAAREPGL GDLDMSIFDQ LAVNDPKPPR EDDDSDGDQG KNPS