| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4378 |
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| Symbol | |
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| ID | 8885579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4668344 |
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| End bp | 4669411 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | secreted protein containing a PDZ domain-like protein |
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| Protein accession | YP_003513118 |
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| Protein GI | 291301840 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGGC GCGGGCTGAC GGTGCTCATA GGCGCGATCC TGGTGTCCGT CATGACCTGG
CAGGCGCTGT CGATGCGAGT GGCCTATGTG GGTCTGGGCC CCGGCCCCAC CTACGACGCG
CTGGCCGAGT ACACGTTCAA GGACGACGAC GGCAAGAAGA AGACCGTCGA GCTGATCAGC
GCCGACGAGA AGTACTCGTC CAAGTCGAAG GGCCAGCTGC GACTGGTGAC GGTGCGCATC
CACGACGACA TCGAGCTGGC GCGGGCGCTG TACTACTGGC TGTCGGACGA CTACGCCGTC
GTGCCCCGGG AGTTGCAGTT CCCCGAGGAC AAGAGCGACG AGGAGATCGC CGCCGAGCAG
GAGGAGATGT GGGAGAACTC GCAGGCCGCC GCCGAGACCG CGGCGCTGCG CGAGTTGGGA
GAAGAGGTCG AGGTCACCGT CACCAAGGTC GACTCCGACT CCCCCTCCAA GGGTGACCTG
AAACGCGACG ACGTCATCAC CGCCGTAGAC GGTGAGGAGG TCACCTCGCA GGAGCGGCTG
GCCGAGCTGC TGGCCGCCGC CGCGGCCAAG GCACCGGGCG AGGCCGTGAA GCTGACGGTC
GACCGCGACG GCAAGGACAA GAAGGTGAAG GTCACACCCG AGGAGAACTC GCAGGGCGTG
GCCATCCTGC CCGGCGTCGA CGTGGAGCCG AAGCAGAAGG ACCCCTATGG ACTGAAGGTC
ACCGCCGAGG GACTCAACGT CGGCGGACCG TCGGCGGGCC TGATCTTCGC GCTGGCCATG
GTGGACCGGG TCTCCAAGGA GGACCTCACC GGCGGCGCCG ACATCATCGG CACCGGTGAG
ATCGACGAGG ACGGCAACGT CGGCGCCATC GGCGGCATCG CGCAGAAGGT GGTGGCGGCC
TCGCAGCAGG GTGCGAAGGT CTTCCTGACA CCGGCCGACA ACTGCGCCGC CGCCAAGGCC
AACGTCCCGG ATGGATTGAA ACTGATCAAA GTGAGCACCC TGGACGGTGC TCTCAAGGAG
CTCGAGACCC TGCGCGAGGG TGGCGAACCG ACCACCTGCT TAACTTGA
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| Protein sequence | MRRRGLTVLI GAILVSVMTW QALSMRVAYV GLGPGPTYDA LAEYTFKDDD GKKKTVELIS
ADEKYSSKSK GQLRLVTVRI HDDIELARAL YYWLSDDYAV VPRELQFPED KSDEEIAAEQ
EEMWENSQAA AETAALRELG EEVEVTVTKV DSDSPSKGDL KRDDVITAVD GEEVTSQERL
AELLAAAAAK APGEAVKLTV DRDGKDKKVK VTPEENSQGV AILPGVDVEP KQKDPYGLKV
TAEGLNVGGP SAGLIFALAM VDRVSKEDLT GGADIIGTGE IDEDGNVGAI GGIAQKVVAA
SQQGAKVFLT PADNCAAAKA NVPDGLKLIK VSTLDGALKE LETLREGGEP TTCLT
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