Gene Snas_4281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4281 
Symbol 
ID8885482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4573086 
End bp4574357 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003513023 
Protein GI291301745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.502977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG GCACCGCGGG GCCACCGTCG GCACTGACCG AACCGCGCGA CAAGGTCGGC 
CCCGGGTGGA TCGGCGGCAT CACCGCCGGG GTGCTCGGCA TCTACATGGC GTTCTTCACG
CCGATCCAGA TCCTGCTGCC GATCCAGCTG GCCGCCATCG ATCCCGGCTC GAAAGTGGAG
ACCTTCGGTC TGGTCACCGG CGCCGGAGCC CTGGTCGCGG TGATCGCCAA CCCGTTGGCC
GGGGCGCTGT CCGACCGCAC CACCTCCCGG TTCGGCCGCC GTCACCCCTG GACGCTGGGC
GGCGTGGTGC TCGGCGCGGC GGCCCTGATC GCGCTGGGGT ACCAGACCTC GGTACTGGGT
GTCCTGATCG GATGGTGCGC GGCACAGGCG GCGCTCAACG CCGCGTACGC CAGCATCAAC
GCCGCCGTGC CCGACCACGT GCCGGTGCGG CAGCGCGCCG TGGTCTCCGG CTGGATCGGG
TTCCCGCAGG CCCTGGGCCT GGTGCTGGGC GCGATCGTGG TGACGATGCT TGTCACCGGC
GCCGAGGCCG GATACCTGGC GATCGCGCTG GCCGCGGTGG CGCTGGCGTT GCCGTTCGTC
CTGACCACCG CCGACCCGCC GCTGTCGCGC GCCCATCGGC CGACGGTGTC GTGGCGGCGG
ATCCTGGCCG GGTTCTGGGT GAGCCCGCGC GAGCACCCGG ATTTCGCCTG GGCCTGGATA
ACCCGGTTCC TGGTGATGCT CGGCAACTCG ACCGGAACCT TGTACCTGCT GTTCTTCCTG
CAGGACGCCG TCGGCTACGA GCGGCTGTTC CCCGGCCACA GCTCCGACGA GGGCGTCTTG
ATCCTCACCC TCATCTACAC CGCCGGGGTG ATGGCCACCG CCGTGGTGTC CGGAGTGGTC
TCCGACCGGA TCGGCCGCCG CAAGTCACTG GTCACGGCCT CGGCGGCGGT GATCGCGTTC
GCCGCGCTGC TGCTGACCTT CTGGCACACC TGGCCGATGT CCATGATCGC GGCCGGGGTG
ATGGGAGCCG GGTTCGGCGT CTACCTGTCG GTGGACCAGG CGCTCATCAC CCAGGTGCTG
CCCGCCGCCG CCGACCGCGC CAAGGACCTC GGCGTCATCA ACATCGCCAA CTCGGCCCCG
CAGGTGCTGG GCCCGGCGCT GGCGGCACCG ATCGTGGCGG GCCTGGGCGG TTACACCGGC
CTGTACGCGC TCACCGCGGC CATCACGCTG CTGGGCGGCG TCCTGGTCTG GAAGATCCGC
TCCGTCCCCT GA
 
Protein sequence
MTTGTAGPPS ALTEPRDKVG PGWIGGITAG VLGIYMAFFT PIQILLPIQL AAIDPGSKVE 
TFGLVTGAGA LVAVIANPLA GALSDRTTSR FGRRHPWTLG GVVLGAAALI ALGYQTSVLG
VLIGWCAAQA ALNAAYASIN AAVPDHVPVR QRAVVSGWIG FPQALGLVLG AIVVTMLVTG
AEAGYLAIAL AAVALALPFV LTTADPPLSR AHRPTVSWRR ILAGFWVSPR EHPDFAWAWI
TRFLVMLGNS TGTLYLLFFL QDAVGYERLF PGHSSDEGVL ILTLIYTAGV MATAVVSGVV
SDRIGRRKSL VTASAAVIAF AALLLTFWHT WPMSMIAAGV MGAGFGVYLS VDQALITQVL
PAAADRAKDL GVINIANSAP QVLGPALAAP IVAGLGGYTG LYALTAAITL LGGVLVWKIR
SVP