Gene Snas_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4271 
Symbol 
ID8885472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4563193 
End bp4564356 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content67% 
IMG OID 
Productlow temperature requirement A 
Protein accessionYP_003513013 
Protein GI291301735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGC CCCTGCCCCG TTGGTACCGC GAGAAGGTCG AACCCGTCCC CGACACCGAG 
GACCAGAAGG TGTCGACCCT GGAACTGTTC TTCGACCTGG TATTCGTCTT CACCGTCACC
CAGCTGACCC ACGTCGTCGC CCACGACTTC ACCTCCGGTG TGATCCAGAC ACTGCTGATG
TTCGCCGTGA TCTGGTACAT GTACTCCGCC TACGCGTGGA TGACCAACGC GGTGCCGCCG
CAGCGCCCGG CACGCCGGGT GCTGCTGCTG GTCGCCATGG CCGGATGGTT CGTGATCGCG
CTGGCGGTCC CGGACGCCTT CCACGGCACC GGCGTGTGGC TGGGTGCCGG GATGGTCGTC
GTGGTCGTGC TGCACGGCCT GATGTACCTA CAGTCGACGA ACCGGATCCT GGTGTTCCTG
AGCGTCAACC TCACCGGCGC GATCCTCATC GTCATCGCCG GGTTCCAGCA TGGACTGCCG
CAGTACCTGC TGTGGACGGC CGCGCTGGTC GTCATGTGGC TGGGCCCGGC CCTGACCGGG
CAGGAGGGCT TCCCGCTGCA TCCGGGTCAC ATCACCGAAC GGCACGGACT GGTCGTCATC
GTCGCGCTCG GCGAGTCGAT CATCGTCGTC GGCAGTGGCG CCCTGAAGGT CGGGGAGAAG
ACCGGGGAAC TGAACGGCCA GATCATCTCG GTGGCGATCC TGGGACTGGC CCTGACCGCC
TGCCTGTGGT GGGCGTACTT CACCGCCGAC GCGGTGCGCG CCGAACACGC CCTGGTATCC
ACCGGCGACC AGGTGCGCCG CACCCGGATG GTGCTGCTGG GCTTCTTCTT CAGCCACATC
CCGATCCTGC TGGGCATCGT CGGCATGGCC GCCGGTCTCG GCGACGCCAT CGGCAAGGCC
ACCAAACCGC TGGCGGGCGG GCCCGGGATC GCCCTGGGCG CCGGAGTCGC GCTGTTCCTG
CTGGGCTCGG TGCTGTTCAG GATCTCGCTG CGGCTGCCGG CCGGGACCGT GCGCATCGTC
GCGGTCGTCC TGAGTCTGGC GACCATCCCA CTGGGACGGG TCGCGGCGGT GTGGCAACTC
GTCGCGTTGT TCGGCATACT GCTGGCCGTA GTCATCACCG AAGAGGCTTC CCGCCGTCGA
GACCAACTCG TTACCTCCGA GTAA
 
Protein sequence
MNLPLPRWYR EKVEPVPDTE DQKVSTLELF FDLVFVFTVT QLTHVVAHDF TSGVIQTLLM 
FAVIWYMYSA YAWMTNAVPP QRPARRVLLL VAMAGWFVIA LAVPDAFHGT GVWLGAGMVV
VVVLHGLMYL QSTNRILVFL SVNLTGAILI VIAGFQHGLP QYLLWTAALV VMWLGPALTG
QEGFPLHPGH ITERHGLVVI VALGESIIVV GSGALKVGEK TGELNGQIIS VAILGLALTA
CLWWAYFTAD AVRAEHALVS TGDQVRRTRM VLLGFFFSHI PILLGIVGMA AGLGDAIGKA
TKPLAGGPGI ALGAGVALFL LGSVLFRISL RLPAGTVRIV AVVLSLATIP LGRVAAVWQL
VALFGILLAV VITEEASRRR DQLVTSE