Gene Snas_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4216 
Symbol 
ID8885417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4512712 
End bp4513701 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID 
ProductC-5 cytosine-specific DNA methylase 
Protein accessionYP_003512958 
Protein GI291301680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.757892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.411127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCTAC AGCAAGACAC CCTTAGGACC CGCCCACAGT GGCGGGTCTT TTCGCGTCGT 
GTCGGGGGTG AACTCGTGCC CCGGATCGGT TCCCTGTGCT CGGGAATCGG CGCCCTCGAC
GACGCCGTCG CTGCCGTCAC CGGCGCCGAG CTGGCCTGGG TCGCTGATAC CGACCCCGAC
GCCGCGCGCG TCCTCACCCA CCGCCACCCA CACGCCCCGA ACCTCGGCGA CATCCGCACC
GCCCCATGGG AAGACGCCGA ACCGGTCGAC ATCCTGGTCG CCGGGGTGCC GTGTCAGCCG
GTATCCAAGG CCGGAAAACG AACGGGGGTA GCCGATGCCC GGTGGCTGTG GCCGCACGCC
GCGCGAGCCG TTCGCGACCT TCGACCCGCC CTCATTGTCT TGGAAAACGT CGCCGCCCTG
CGCACCAGAG GACTCGGCGA CATCCTCACC GACCTGGCCG CGCTCGGGTA TGACGCACGC
TGGCTATGCC TACGCGCTTG CGAACTCGGG GCCCCGCACC AACGAGACCG CATGTTCCTC
GCCGCTGCTA CCCACCCCCA ACGCCACCCA CGGTCGCAAG ACCACCCGAA CCGGTTTGCT
GCTGCCGGGA GTGGCCGAAC TCCTTCCCAC CCCGCGAGCC AGCGACGGCA CCAAAGGCTC
ACCCCGCCAA CGGGGCTCCA AAGGGGACGC GACCTTGCCG TCACTGGTGC TGAGACTTGG
GGCAAATACG CCCCCGCCAT CGCCCGATGG GAACACCTCA CCGCCCGACC AGCGCCCGCA
CCCACCGCAC CGACCGGACG CGGCGAAGCC CGGCGCCTGA GCCCCCGATT CGTCGAGTGG
ATGATGGGTA TCAACTCGGG GCACGTGACC GATGTGGAGG GAATATCCCG CACGGCGCAA
CTGCGCTTGC TGGGAAACAG CGTGGTCCCC GCCCAGGCCG AGGCAGCCGT GCGCCTCCTG
CTGGACGACA CCCTATGGCC GAGACCGTGA
 
Protein sequence
MSLQQDTLRT RPQWRVFSRR VGGELVPRIG SLCSGIGALD DAVAAVTGAE LAWVADTDPD 
AARVLTHRHP HAPNLGDIRT APWEDAEPVD ILVAGVPCQP VSKAGKRTGV ADARWLWPHA
ARAVRDLRPA LIVLENVAAL RTRGLGDILT DLAALGYDAR WLCLRACELG APHQRDRMFL
AAATHPQRHP RSQDHPNRFA AAGSGRTPSH PASQRRHQRL TPPTGLQRGR DLAVTGAETW
GKYAPAIARW EHLTARPAPA PTAPTGRGEA RRLSPRFVEW MMGINSGHVT DVEGISRTAQ
LRLLGNSVVP AQAEAAVRLL LDDTLWPRP