Gene Snas_4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4106 
Symbol 
ID8885307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4376543 
End bp4377166 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003512850 
Protein GI291301572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0938506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCGGG AACAGGCGGG GCGAGCACTC GCCGCGAACT TGCGCGCGAT ACGCGAGGCG 
GCGGGGCTGT CGCTGTCGGC GGTGGCGCGC GAGTCGGGGA TCGCCAAGGG CACCCTGTCG
CAGTTGGAGT CCGGGACCGG CAACCCCACC ATCGAGACGG TGTTCAGTTT GTCAAACACC
CTGGGGGTGC CGGTGTCGTC GCTGTTGACC GAGCGCACCG ACCCCGACGT GGTGCTGGTG
CGGTCGCGGG ATCTGGAGGT GCTGTCCAGC AACGCCGTGG ACCTGCGGAT GTTGCGGCGC
ATGGACACCG CGGGCGCCGT CATCGAGTTG TACGACCAGC GGGTGCGGCC CGGTGCGGTC
CAGCACTCGG AGGGCCACCC CGGCAAGGAG CACGTGGCGG TGACGTCGGG CCAGCTCAGG
GTGGGTCCGC CCGAAGCGCC CCACGAGCTG GGGCCCGGGG ATTACGTTTG TTTTCCGGCC
AACGGCCCGC ACGTCTACGA GGCGGTGGAC GGCCCGGTGA CCTCGATCCT GATGCTCGAG
TACCCGGCCA ACGCGCAGCC TCACGCGCTG GCGGTGTCGT GTGCCGGGCC GGGCGGGGTG
AAGCGGCCGC ATACCGGGGG TTGA
 
Protein sequence
MVREQAGRAL AANLRAIREA AGLSLSAVAR ESGIAKGTLS QLESGTGNPT IETVFSLSNT 
LGVPVSSLLT ERTDPDVVLV RSRDLEVLSS NAVDLRMLRR MDTAGAVIEL YDQRVRPGAV
QHSEGHPGKE HVAVTSGQLR VGPPEAPHEL GPGDYVCFPA NGPHVYEAVD GPVTSILMLE
YPANAQPHAL AVSCAGPGGV KRPHTGG