| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4000 |
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| Symbol | |
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| ID | 8885201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4268621 |
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| End bp | 4269559 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | pseudouridine synthase RluA family |
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| Protein accession | YP_003512745 |
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| Protein GI | 291301467 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.782666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACC GGGAATCGCG GGAGGTGCTG GTCCCCGACG GCCTCGACGG ACTGCGCATC
GACCAGGTGA TCTCGCGGCT GTTCGGGCTG TCGCGCACCG TCGCGGCCGA ACTCGTCAGC
GCCGGAGAGG TCACCGTCGA CGGCCAGGAG TGCATGAAGT CGACCCGGGT GGCCGCTGGC
GGCCAGCTGT CGGTGCTGCT GCCCGAACCC CCCAAGCCCG CCTCGGCCCC CGAACCCGAA
CTCGTCGAGG GACTGGCCGT CATCTACTCC GACGACGACA TCGCGGTGGT GGACAAGCCC
GTCGGCGTCG CCGCGCACTC CAGCCCCGGC TGGAACGGCC CCACCGTCGT CGCGGGACTG
GCCGCCGCCG GACACCGCAT CAGCGTCCAC GGCCCGCCCG AGCGGCAGGG CATCGTGCAC
CGCCTCGACG TGGGCACCAG CGGCCTGATG GCGGTCGCCA AGAGCGAACG CGCCTACTCG
GCGCTCAAGC GCGCCTTCAA ACAGCGCGAG GTCGACAAGC GCTACCGCAC CGTCATCCAG
GGCCACCCGG ATCCGTTGCG CGGCACCATA GACGCCCCGA TCGCCCGCCA CCCCGGACAC
GACTTCAAGT TCGCGGTCCG CGCCGGTGGC CGCGCCAGCA TCACCCACTA CGACACCCTC
GAGGCGTTCC CGGCGGCCAG CCTGCTGGAC GTTCAGCTGG AAACCGGTCG CACACATCAG
ATCCGGGTGC ACTTCTCGGC TTTGCGACAC CCGTGTGTCG GGGACCTGAT TTACGGTGCC
GACCCGACCT TGGCGTCTAA GCTTGGCCTG ACTCGCCAGT GGCTGCACGC CTACCGGCTG
GGGTTCATCC ACCCCGGCAC CGCCAAGCCG GTGGAGTTCC GCTGCGAGGA TCCACCAGAT
CTCGCCCACG CGCTGCGGGT ATTGCGCGGC CTGGATTGA
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| Protein sequence | MSNRESREVL VPDGLDGLRI DQVISRLFGL SRTVAAELVS AGEVTVDGQE CMKSTRVAAG
GQLSVLLPEP PKPASAPEPE LVEGLAVIYS DDDIAVVDKP VGVAAHSSPG WNGPTVVAGL
AAAGHRISVH GPPERQGIVH RLDVGTSGLM AVAKSERAYS ALKRAFKQRE VDKRYRTVIQ
GHPDPLRGTI DAPIARHPGH DFKFAVRAGG RASITHYDTL EAFPAASLLD VQLETGRTHQ
IRVHFSALRH PCVGDLIYGA DPTLASKLGL TRQWLHAYRL GFIHPGTAKP VEFRCEDPPD
LAHALRVLRG LD
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