Gene Snas_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3991 
Symbol 
ID8885192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4261652 
End bp4262041 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content68% 
IMG OID 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003512736 
Protein GI291301458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.79301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.524999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCAAACGCAT CGCCTCCGGC GGCCCCTGGG AACAGCTCTA CGGCTACGTC 
CGCGCCGTCA AGGCCGGACC CTGGGTCATC AGCTCCGGCT GCACCTCAAC GGTCGACGGC
AAGGTCGTCC ACGTCGGCGA CGTCGCCGCC CAGGCCAAGG AAGCCTTCCG CATCGCCCTG
GACTCGCTCG TGGAAGCCGG AGCCAGCCTC ACCGACGTCG TCCGCACCCG CATGTACGTC
ACCGACCCGG TCCACGCCGA CCCGGTAGGC CGCGCCCACG GCGAACTGTT CGGCCTCGTC
AAACCCGCGG CCACCCTCGT CGTCGTCTCC CACCTCCTCC ACCCCGACCA ACTCGTCGAA
GTGGAAGTCG AGGCATACCA CCAGGACTGA
 
Protein sequence
MTDIKRIASG GPWEQLYGYV RAVKAGPWVI SSGCTSTVDG KVVHVGDVAA QAKEAFRIAL 
DSLVEAGASL TDVVRTRMYV TDPVHADPVG RAHGELFGLV KPAATLVVVS HLLHPDQLVE
VEVEAYHQD