| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3989 |
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| Symbol | |
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| ID | 8885190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 4257990 |
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| End bp | 4261001 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003512734 |
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| Protein GI | 291301456 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0138619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.888144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTCT CGATACTCGG ACCGTTGCGA GTCCAGCACG GCGGCCGTTC CGTCCCGATC
TCCGGTCGCC ACGCTCCCAA GCTGCTTGCG GTATTGCTGG TCGACGCCGG GCGTCTCGTC
ACCGTCACCC GTCTGATCGA AACGCTGTGG GCCGAGGATC CACCCGCCAC AGCGAAGCGA
CAGGTCCAAA ACGTTATGGC GGCGTTGCGC CGCGCGTTGC CGGAACCGGA TGCCATCGAG
GCGACCGGCA ACGGCTACCG ATTGGAGCTT GAATCGGCCA CTGTGGATCT GCGGGAGTTT
GAGCGATTGC GGTCGCTCGC CCGAGCGGCC GAACCACGGG AGGCATTGCG ATATCTGCGA
GAAGCGTTGC GACTGTGGCG GGGCGAGGCC CTCGCGGGCT TGACGGGGAG CAGCATCGAA
GCGGCGGCGG CGAAGCTCAA CGAGGCGAGG ATCTCGGCCA TCGAGGAACG CGTCGAGCTC
GAGCTGGACC TGGAACGACG TTTGGACGTC GTCGGCGAAC TGCGGGAGCT GCTGGTGGCG
CACCCGTTCC GGCAACGGTT GACGGGACAA CTGATGCGGG CGCTTTGGTA CGCGGGGAGC
AAGTCAGAGG CGTTGGAGGT CTACCGGAAA CTGCGGAAAC GATTGGCCGA GGGGCTGGGT
CTGGATCCGG ACGCCGAACT GGCGCGGTTG CACTCGGCGA TCCTGCGGGG TGAGCCCGAA
ACCCCCGCTG CCGACCGGAC CACAGCGGCG GTGCGGGAGC GGACGGTCCC GGCACAGCTG
CCCGCCGCTC CGTCGACGTT CACGGGTCGG CGTAAGCAGG TGGTGGCGCT GGACGAGCTA
CTGGAGCAGG GGCGGAACAC GGCGGTGGTG TCAGCGATCG CGGGGATGGG TGGTGCGGGG
AAGACGGCGC TGGCGTTGTA TTGGGGGCAC CGGGTGCGGG AGCGGTTTCC AGACGGGCAG
TTGTACATCA ACTTGCGCGG GTACGACGAA GCGAAACCGG TCGCCGCGAT CGACGCGCTG
GGGCGGTTTC TGGTGGCACT GGGGCAAACC AGTACGACTG TCCCATCCGA TGTGGATGAG
GCGGCGGCAT TGTTCCGGTC GCTGCTGTCC GAGCGGCGGA TGCTCGTCAT TCTCGACAAC
GCCCGCGAGG CAGCCCAGGT CCGACCGCTG CTGCCGGGCG GCGCCGGGAA CCTGGCGATC
GTGACCAGTC GGGATCGGCT GGCAAGCCTC ACCGCACTTG AAGGCGCTGA GCCGATTCGG
CTGGATACCT TGAGCCAGAC GGAGTCACTG GAGTTGCTGG CGAACATCGT GGGAGCCGGG
CGGCTGGACA CTGACCCGGA AGCGGCACAT CGGATCGCCG AGCTGTGCGG ACGGCTGCCG
TTGGCCTTGC GGATCGCGGG GGCGAGCTTG GCGGCGCAGC CAGACCTGGC ACTCGGTGAG
TTCACCGATG TACTGGGCGG GCCGGATCGG TTGCGGCGAT TGGCGCTTGA CGGGGACAAG
CTCGCCAGCG TGTCCAACGT GCTCGAATTG TCCGTGGCAG CACTCGATGA CACGAGCCGC
GAACTGCTGC TGAAGCTGGC GCAGATCCTG GGCGACGACT TCTGTCATGG ACTGGCGGTC
CACCTGTCCG AACTGGACGA AACCGGGGCC GGGCGAAATC TGGCGGCCCT GGAGGCCGCA
CATCTCATTG AGCAGCACAT CCCGTCCCGG TACCGTATTC ACGACTTGAC TCGCGATTAC
ATGAGACAAC AGGGTCGCCG GACCTTCGAC GACGTTCGTC TTCACGACAT TCAAACCTGT
TTCATCACTT GGCATTACGC TGTCCGGCGC GAAATTTCCG TCACAGAGGC ATCGAATGTC
GTTTCCGCGT TCAACGCGTG GCGAGAACAT CCTGAGATCT GGAAACTCGC GACGATGTTC
TCAGTCTTCA GCGGGACCGA GTACAAGCCC ACTCAGCTAC TTCAGTTGGC CGAGTGGGCA
CTCGTCGCGA GAAAAGACGG CATGGATCCC ATGGGCAACG CGTATCTCCT CATGGAGATC
GCGATTCTGT ATCGCGCCAT GGGAAACCGG AATCTGGCGG TCCGCGAAGC AGAGAAGGCC
ATCGATGTCG TTCACCGAGC GGGTCTGGAG GATCCCGACG GGCGTTTCCG GGGGAATCTG
GCATTGATGT ACATGGAGGT GGGCCAGTAC ATCCAAGCCG AGACGCTCAT GCGAGACGCG
CTGCGATCGG CGCGAGAGTC AGGTGACGCC CAGAACATCA AGTCCTGTTC GTCGTCCCTG
GCCGCCATCT GCCGCAGGTT GGGTAAGTTC GCCGACGCCG AGACACTACT CAACGGTGTC
ATTGACAATC CGGAGCTGCC CACACAACCC ACTCTGGACA TTACCGCGAA GGCCCAACTA
GGCGCCCTCT ATCTGGACAT CGGCCGCCTT ACCGAGGCTC TCACGGTCCT TGACGAGGTG
CACTCGCTGC CGCCGGACGT GGGAGGAATG CGATCACGCA CGTTCTCGCG AATCCTGCGT
ACTGAGGCTC TCTGCGCGCT GGGCCGGTAC GAATCCGCGC GTCCAGAGTT GACCGACGTA
CTCGCTGTCG CCGTTCGCAT GGACCTCACC GGGGCGGTCA TGCTGGCTAC GATCCAGTTG
GCGCACCTCC ACAGCGATTC GGGAGATCAA CAAGCCGCGC TACGAGCCCT GGACACACTC
GGCCCCCATC ACCTCAACGA ATCCGACCAG AAATTCGCCG CTGAGATCGC GCGGCTGCGG
TGCATCACCA ACACCCGGCT TCGACGGTTC GCGAAAGCCG TCACGTTCGG CGGTTACGCG
TGTGACCGCT ACGCGAACAT GTCCTATCCG CTGATGCACG CCAGGTCGCT GGCGGCGCTG
GCCAACGCGT ACGAGGGTGC AAACAATCCC GCCCAAACTA CGGCCTGTCG CGCGCAGGCC
TTCGATATCT TCTCCCGGCT GGGCGTCCCC GAAGCGGACG AACTCCGCGA GCTCCTCGGC
CCCGCCCCGT AA
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| Protein sequence | MEFSILGPLR VQHGGRSVPI SGRHAPKLLA VLLVDAGRLV TVTRLIETLW AEDPPATAKR
QVQNVMAALR RALPEPDAIE ATGNGYRLEL ESATVDLREF ERLRSLARAA EPREALRYLR
EALRLWRGEA LAGLTGSSIE AAAAKLNEAR ISAIEERVEL ELDLERRLDV VGELRELLVA
HPFRQRLTGQ LMRALWYAGS KSEALEVYRK LRKRLAEGLG LDPDAELARL HSAILRGEPE
TPAADRTTAA VRERTVPAQL PAAPSTFTGR RKQVVALDEL LEQGRNTAVV SAIAGMGGAG
KTALALYWGH RVRERFPDGQ LYINLRGYDE AKPVAAIDAL GRFLVALGQT STTVPSDVDE
AAALFRSLLS ERRMLVILDN AREAAQVRPL LPGGAGNLAI VTSRDRLASL TALEGAEPIR
LDTLSQTESL ELLANIVGAG RLDTDPEAAH RIAELCGRLP LALRIAGASL AAQPDLALGE
FTDVLGGPDR LRRLALDGDK LASVSNVLEL SVAALDDTSR ELLLKLAQIL GDDFCHGLAV
HLSELDETGA GRNLAALEAA HLIEQHIPSR YRIHDLTRDY MRQQGRRTFD DVRLHDIQTC
FITWHYAVRR EISVTEASNV VSAFNAWREH PEIWKLATMF SVFSGTEYKP TQLLQLAEWA
LVARKDGMDP MGNAYLLMEI AILYRAMGNR NLAVREAEKA IDVVHRAGLE DPDGRFRGNL
ALMYMEVGQY IQAETLMRDA LRSARESGDA QNIKSCSSSL AAICRRLGKF ADAETLLNGV
IDNPELPTQP TLDITAKAQL GALYLDIGRL TEALTVLDEV HSLPPDVGGM RSRTFSRILR
TEALCALGRY ESARPELTDV LAVAVRMDLT GAVMLATIQL AHLHSDSGDQ QAALRALDTL
GPHHLNESDQ KFAAEIARLR CITNTRLRRF AKAVTFGGYA CDRYANMSYP LMHARSLAAL
ANAYEGANNP AQTTACRAQA FDIFSRLGVP EADELRELLG PAP
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