| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3972 |
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| Symbol | |
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| ID | 8885173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4236915 |
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| End bp | 4239440 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_003512717 |
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| Protein GI | 291301439 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.120133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGTGCG GTTCGGGACT GCCCGACACT GTCGAGGTGC TGCTTCCCGA ACCCGCGACC
GTGCCCGGCG GTGACCTGCC GGTCCGCCAC GTTCTGCCGG AACTTCGCGA AGCCTTGGAC
GGCAACGGTC GCGCCGTGCT GGTCGCGCCG CCGGGCTCCG GCAAGACCAC GCTGGTTCCG
TTGGCGCTCG CCGATCACCT GGACGGGCGC GTCATCGTCG CCGAGCCCCG GCGGGTCGCG
GTGCGGGCCG CCGCCCGACG GATGGCCGCG CTGAGCGGCA CCCGGCTCGG CGAGGAGATC
GGCTACACCG TGCGCGGCGA CCGCAAGACC TCGGCGCGCA CCCGCGTCGA GGTCGTGACC
ACGGGCGTCC TGGTGCAGCG GCTGCACCGC GACCCGGAAC TGCCCGGCGT CGCCGCGATC
GTCGTCGACG AATGCCACGA ACGCCACCTC GACACCGACC TGGCGCTCGG TTTCGCCGTC
GACGTGCGCG CCAACCTGCG CGACGATCTG CGGCTGCTGG CGACGTCGGC GACCGCGCGC
GCCGAGAAAC TCGCCTCGTT CATGGGCACG GCCACACCCA TCGTCACCGC CACCGCCTCG
CCGCACCCGA TCACCACCGT GTGGGCACCA CCGGCCCGAC CCGTGTCACC GCCGCACGGC
CTGTGGGTCG ACCCGAAGCT GCTCGACCAC GTCGCCGCCA CCGTCCACAA GGCTCTCGCC
GAGCGCGAGG GCGACGTCCT GGTGTTCCTG CCCGGAGCCG GGGAGATCGA CAAGGTCGCC
GCACGCCTGT CCACTGTGCC CGACGTCGAC GTCCTCACCC TGCACGGCCG CCAGGACTCC
CGCCAACAGG ACGCCGCGCT CCAGCCCGGC GCGCGGCGGC GGGTGGTGCT GGCCAGCGCC
GTCGCCGAAT CCAGCCTCAC CGTTCCCGGC GTGCGCGTCG TCGTCGACGC CGGACTGTCG
CGCGAACCCC GCGTCGACCA CGCCCGGGGA CTGCCGAGCC TGGTGACCGT GCGGGTGTCG
CGGGACTCGG CCACCCAGCG CGCCGGTCGA GCCGCCCGCG AGGCGCCCGG CACCGTCTAC
CGCTGCTGGC CCGAGTTCGA GCACGACCGG CTGCCCGCCT ACCCGCGGCC CGAGATCGCC
ACCGCCGACC TGACCGCGTT CATCCTGCAC CTGGCGCGGT GGGGCGGCGA GGTTCCGCTG
CTGGACCGTC CGGCCGACTC CGCCACCGAA ACCGCCATGT CCACATTGCG CACGCTCGGT
GCGGTGGACG GCACCGGCAC CATAACCCAG CGCGGCGAAG CGTTGGCGGC CATCGGCACC
CATCCGCGAC TGGCCCGCGC GCTGCTGGAC GGTGCCGACT CCATCGGGGC CCGGCAGTCC
TGCGAGGTCG TCGCGCTGCT GTCGGCCGAC ACGTCACCGT CCACGGACGA CCTCGCCGCC
GAACTGCGCG CACTGCGGCA ACGCCGCGAC CGCGCCTGGC AGACCGAGAC CCGCCGCCTC
GAATCCAGCC TCCCCAAACG CCTGGCCGAC GCCACCCGGC CAGCCGCCCC ACGCTCAGCC
GACCAGGCCG CCGCCCTCAT CGTCGGGCTG GCCTTCCCGG AACGGTTGGC CCGCCGCACC
ACCCCCGACG GTCGCGTCTA CCTCATGACC GGCGGCACCC AGGCCGAGCT CGCGCCGGGC
TCCCGAGTCT CCGGAGTGGA ATGGCTCGCC ATCGCCAGCG CCGACCGGCA GCCCGGCCGG
GCCGCCGCCC GGGTCCGGCT GGCCGCCCCC TGCGACCCCG AGACCGCTCT GGCCGCCGCC
GCGCCGCTGC TCACCGAAAC CCGCGACATC GCCTGGCGCG ACGGCGATGT CCGGGCCCAC
CGCCGCGAAA GCCTCGGCGC GATCACCCTC GTCGAACGCC CACTCACCCC CAAGCCCGAC
GAAGCCAGCG CCGCTCTGCG CGACGGACTG CGCGCCGAAG GCCTCAACCT GCTGCGCCCC
AGCCGCGAAG CCGAAACCCT GCGCTCCCGG CTCGCGTTCT GCCGCCACGT CTTCGGGGAC
CCATGGCCCG ATGTGGACGA CGCCGCGCTG CTGCTGCGCC TCGACGACTG GCTCGGCCCC
GAACTGGCCA AGGCCCGCCG CCGCGCCGAC CTGGAACGCG CCGACGTCGC CAGCGCGCTG
CGGCGGCTGC TGCCGTGGGA ACAGGCCGCC GCCCTCGACC GGGTCGCTCC GTCCCGCGTC
ACCGTCCCCA GTGGCTCCAA GCTCGCCGTC GACTACACCG ACCCGACCGC CCCGAAGCTC
GCGGGCAAAC TGCAGGAGTT CTTCGGCTGG ACCACCACCC CCACGATCGC CGACGGCCGC
GCCAAGCTCG TCGTGCACCT GCTGTCACCC GCTGGCCGTC CCGCCGCCGT CACCGGTGAC
CTGGAATCGT TCTGGCGCAC CGGCTACCCG CAGGTTCGCG CCGAGCTGCG CGGCCGCTAC
CCCAAACACC CGTGGCCCGA GGACCCCACC ACCGCCGAGG CCACCAGCCG CGTCAAACGC
CGCTGA
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| Protein sequence | MPCGSGLPDT VEVLLPEPAT VPGGDLPVRH VLPELREALD GNGRAVLVAP PGSGKTTLVP
LALADHLDGR VIVAEPRRVA VRAAARRMAA LSGTRLGEEI GYTVRGDRKT SARTRVEVVT
TGVLVQRLHR DPELPGVAAI VVDECHERHL DTDLALGFAV DVRANLRDDL RLLATSATAR
AEKLASFMGT ATPIVTATAS PHPITTVWAP PARPVSPPHG LWVDPKLLDH VAATVHKALA
EREGDVLVFL PGAGEIDKVA ARLSTVPDVD VLTLHGRQDS RQQDAALQPG ARRRVVLASA
VAESSLTVPG VRVVVDAGLS REPRVDHARG LPSLVTVRVS RDSATQRAGR AAREAPGTVY
RCWPEFEHDR LPAYPRPEIA TADLTAFILH LARWGGEVPL LDRPADSATE TAMSTLRTLG
AVDGTGTITQ RGEALAAIGT HPRLARALLD GADSIGARQS CEVVALLSAD TSPSTDDLAA
ELRALRQRRD RAWQTETRRL ESSLPKRLAD ATRPAAPRSA DQAAALIVGL AFPERLARRT
TPDGRVYLMT GGTQAELAPG SRVSGVEWLA IASADRQPGR AAARVRLAAP CDPETALAAA
APLLTETRDI AWRDGDVRAH RRESLGAITL VERPLTPKPD EASAALRDGL RAEGLNLLRP
SREAETLRSR LAFCRHVFGD PWPDVDDAAL LLRLDDWLGP ELAKARRRAD LERADVASAL
RRLLPWEQAA ALDRVAPSRV TVPSGSKLAV DYTDPTAPKL AGKLQEFFGW TTTPTIADGR
AKLVVHLLSP AGRPAAVTGD LESFWRTGYP QVRAELRGRY PKHPWPEDPT TAEATSRVKR
R
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