Gene Snas_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3966 
Symbol 
ID8885167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4228110 
End bp4230764 
Gene Length2655 bp 
Protein Length884 aa 
Translation table11 
GC content66% 
IMG OID 
Productamidohydrolase 2 
Protein accessionYP_003512711 
Protein GI291301433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.657438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACC CGGTGGTTCA ACAGCTGATG ACCGAGTTCT GCGCCGAGAA GGGACTGTCG 
TCGTGGAGAG ACCCGGACAA GTTCGAGGTG TTCGCCACCC ACTGTGTACT GAGTGACCAC
ACCTTCGACA GTTTCGAAGC TGTCGACTAC CGCATCGGCG GCAGCGAGGA CGGCGGTATC
GACGGCTACG CCGTGGTGAT CAACGAAAAC CTGTTCAACG CCCCCGACGA CGTGGAACGC
TGTCTTCTGG CCACCACCGA CATCTCACCG ACGATCGTCG TCGTCCAGGC CAAGACCTCG
GCCAGCATGA GCCGGGCGAC CATCGCCGAT CTGCGGGTTC GCGTCGAGTA CATTCTGCGG
ACCGAGGAGC CGCTCGACCA CGCCGCCGAC GTCGAACCGC TGCGAGAGTG CCTGCGCCGG
ATCAAGAAAC ACCGAGACCG CCTCAACAGC CGCGGCGTGC GCCTCGAGAT CGCCTACGCC
AGCACCTCGC TGGGCGCCAA CGACGAGCTG CGCCGCGAAG CATCCCGCGC CGCGCAAGCT
TTGGCCCACA ACGGGATCAT CGGTGAGGTG AGGTTCGAGT TCCTCGGCCG TACCGAACTC
AGCCGCCGCT ACGAACGAGC ACAGTGGTCC TCCAAAGCGA AACTGACCTT CACCGGCCAC
TACGCCCTGC CCGTTGACCC CGGCATCACC CAGGCCCGGC AGGGGCTGGT CCCGGCCGCC
GAACTCGTGC AGGCCATAGC GGATGCCTCC GGCGACCCGA AGCCCAACCT GTTCAGCGAG
AACATCCGCG AATACCAGCC CGCCGCACCC GTTAACGACG AAATCCGCGA AACCCTGCGC
GACGAGGCGA CCCGCCGCCG TTTCGCCGTC CTCAACAACG GCATCACGAT CGTGGCACGA
TCACTGCGAG CCTGGCAGGA CTCCCAAGTG GTCATCCGCG ACTTCCAGGT CGTCAACGGC
TGCCAGACCT GCTACGTGCT CGCCGAGGAA TCCGATCGGC TCGACGGCGT CGCCGTGAAG
GTGCAGATCA TCGAATGCGA CGACGACGAG GTCATCAACG AGATCGTCAC CGCGACCAAC
CGGCAGACCG AGATCCCCAA GGTGTACTTC ACCAACCGGA ACCAGCTGAT GCGGCGCCTG
GAAGTCCACT ATCGCCATCA ATACGACGAG AATCGGCCGC TCTACTTCGC CAGGCGCCCC
GGCAAAGGCG CCAACGACCT GCGCCGCGGC GTCATCGGCA TGAACCCGCA ACTGCGCGCC
CATGTCGCGA TGTTCGGCCG ACCCGCACCG TCCAGCGGTC ACCGGGATCT GGACACCGCG
TTCGACGAAC ACTTCGGCAA CGCCTCCGAG CGCGAGTTCT ACACCGCCGG TGCGGCACTG
TACCGCTGGG ACTGGCTGGC CGACACCAGA CGCATCCACA AACGCTACCG ATCGCTCGGC
TACCAGGCGA TCGCCGTGCT GGGCGTGCTG TACGGCGTCC GGCCGCTCGT CGGCGACCAC
AAAGCCAAGG GCAAACGGCT GGACCCCGTC GACGAGGTGC TCTGGTCGGA CGGCGGCTGG
GAACTGCTCG CCCTCGACAT CCAATCCGTC CTGGACAAAG CGCTGACCCA GTCGTCCTCA
CCCGACCCGA AGACCGCGGC CGCGTCGATC ACCTTCGGCA AAACAGTAGT GGCCCTCGCC
CGGCAACAGC CGCGCCGATT ACCCCGGCCA GCGCGCGCCA CTCACACCGG TGGCACGCTG
GACGCCATGA CCTCGCGGGC CGAGCCATCG GCAACCATCG ATCACGACGA CTCGGCGGCG
GTCGCCGCGT TCCGCGAACG CATCGGCATC GAGTCCATCA TCGACGTCCA CACCCACTTC
ATGCCGCGAC GGGTGCTGGC GAAGGTCTGG GCCTACTTCG ATCTGGCGGG ACCGGTGATG
GGTCGGGCGT GGCCGATCAC CTACCGCCAC GAGGAAGAGA GACTGCTGCG ACTGTTGCGC
GGTTTCGGCG TCCGCGCGTT CACCTCCATG CTGTACCCGC ACAAGCCCGG CATGGCGCGC
TGGCTCAACG ACTGGGCCGC CGACTTCGCC GCCCGCACAC CCGATTGCCT GCACACGGCG
ACATTCTTCG ACGAACCCGG CGCGATCGAC GACGTCACCC GCGCCGTCGA CCAGGGCGCG
CGGGTCTTCA AATGCCACCT CCAGGTCGGC GGCTTCGACC CCAACTCCCC GCTGTTGGAC
AAGGTGTGGG GACTGCTGGC CGACGCCGGG ATTCCGGTGG TGACCCATTG TGGATCCGGG
CCGATTCCCG GCGCGCACAC CGGACCCGAG CCGATGGCCG CGCTATTGGA GCGGCATCCC
CGGTTGCCGT TGGTGGTCGC ACATCTCGGG ATGCCGGAGT ACGAGGACTT CCTGGGGCTC
GCCGAGCGGT ATGAGCGGGT CATGTTGGAC ACCACGATGG CGTTCACCAG GTTCACCGAG
GCGATGCTGC CGTTTCCGGA CCGGGCGCTG CCACGGCTGG GGGATCTGGG GGACCGGGTG
CTGTTGGGCA CGGACTTTCC GAACATCCCC TACTCGTACG CGCACGCGTT GGCGGCGTTG
GAGTGCACCG GGTTGGGGGA GGAGTGGTTG CGGGCGGTGT GTCACGACAA CGCCGCGCGG
CTGTTCGGTC TGTAG
 
Protein sequence
MMNPVVQQLM TEFCAEKGLS SWRDPDKFEV FATHCVLSDH TFDSFEAVDY RIGGSEDGGI 
DGYAVVINEN LFNAPDDVER CLLATTDISP TIVVVQAKTS ASMSRATIAD LRVRVEYILR
TEEPLDHAAD VEPLRECLRR IKKHRDRLNS RGVRLEIAYA STSLGANDEL RREASRAAQA
LAHNGIIGEV RFEFLGRTEL SRRYERAQWS SKAKLTFTGH YALPVDPGIT QARQGLVPAA
ELVQAIADAS GDPKPNLFSE NIREYQPAAP VNDEIRETLR DEATRRRFAV LNNGITIVAR
SLRAWQDSQV VIRDFQVVNG CQTCYVLAEE SDRLDGVAVK VQIIECDDDE VINEIVTATN
RQTEIPKVYF TNRNQLMRRL EVHYRHQYDE NRPLYFARRP GKGANDLRRG VIGMNPQLRA
HVAMFGRPAP SSGHRDLDTA FDEHFGNASE REFYTAGAAL YRWDWLADTR RIHKRYRSLG
YQAIAVLGVL YGVRPLVGDH KAKGKRLDPV DEVLWSDGGW ELLALDIQSV LDKALTQSSS
PDPKTAAASI TFGKTVVALA RQQPRRLPRP ARATHTGGTL DAMTSRAEPS ATIDHDDSAA
VAAFRERIGI ESIIDVHTHF MPRRVLAKVW AYFDLAGPVM GRAWPITYRH EEERLLRLLR
GFGVRAFTSM LYPHKPGMAR WLNDWAADFA ARTPDCLHTA TFFDEPGAID DVTRAVDQGA
RVFKCHLQVG GFDPNSPLLD KVWGLLADAG IPVVTHCGSG PIPGAHTGPE PMAALLERHP
RLPLVVAHLG MPEYEDFLGL AERYERVMLD TTMAFTRFTE AMLPFPDRAL PRLGDLGDRV
LLGTDFPNIP YSYAHALAAL ECTGLGEEWL RAVCHDNAAR LFGL