| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3938 |
|---|
| Symbol | |
|---|
| ID | 8885138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4202130 |
|---|
| End bp | 4202531 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_003512684 |
|---|
| Protein GI | 291301406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.014328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGA CCTACGACAA CCCCGAGGCC GCGCCGAAAC CCGGTGGCCA CTACACCAAC
GTCATCAAAG TGGAGTCCGG CGACTCCGTC ACGCTGCACC TGTCCGGGCA GATCGCCCTC
GACCACGACG GCGAGGTGGT CGCGCCCGGC GACATGACCA AACAGTCGCA TGTGGTCATG
GAGATCATCG GCAAGCTGCT GGCCGCCCAC GGCGCCGGAT TCGACGACAT CGTCAACATC
CGCACCTTCC TGACCGATAT GGACAGACTG CGGGAGTACG GCGACGTGCG CCGCACCTAC
TTCGACGGCG AACCCCCGAC CAGCACCACC GTCGAGGTGA CACGGCTGTT CCGTCCCGGC
GCGCTGCTGG AGGTCGAAGT CGTCGCGGTG ATCGCCGCCT GA
|
|---|
| Protein sequence | MRKTYDNPEA APKPGGHYTN VIKVESGDSV TLHLSGQIAL DHDGEVVAPG DMTKQSHVVM
EIIGKLLAAH GAGFDDIVNI RTFLTDMDRL REYGDVRRTY FDGEPPTSTT VEVTRLFRPG
ALLEVEVVAV IAA
|
|---|
| |