Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3894 |
Symbol | |
ID | 8885094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4162011 |
End bp | 4162748 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Peptidoglycan-binding domain 1 protein |
Protein accession | YP_003512642 |
Protein GI | 291301364 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.795843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAATC CGGATCCGGA CAAGATCACC GACGAGATGT GGCAATTGTG GACCGAATGC GAACAGGTCA TCTCCGGCGT GAGGCTGGGA GGGATCTGGG CGGACAAGCC CGGATATCAC AACACAGTGG ACGCCAATCA GGCGAACTGG CCCGACAACT ACTCGATCCA GCTGGGGCTC GATCTGGAAT CCCCGCACAC CAAGGCCCGC GCCATCGACC TGACCATGAG TGACGCCCAG ATGCGGCTCC ACACCGGTAG GCTGCGCGCG GCGGCACTCG ACGGTGACCC GCGGCTGAGC GCGGTGCGGG AGTTCTACGG CACCTTGGAC AGCCAGAACG TTTACGGGCT TATCAAGGAT TCCACGACCG GATCCTGGCG ATCGTCCTCA TCGGATTCAT CGCACCTGTG GCACATCCAC ATCAGCGTAT TCACCACGTT TGTAAACGAC TGGGATTCAC TGGCGCCGAT CGTCTCGGTG CTGGCCGACA GCGAAGGAGA CGACGACGTG ATCGGATTGA AGAAGGGCAA TTCCGGCGAA CGGGTCAAGG GGCTCCAGGC CGCGCTCGGC CGCGCCGGAT ACCCCGTCGA CGTGGACGGC GAATACGGTC CCAAGACCGC CGCGGCACTG CTGGAAATGC GCAAGGACAT GGGGTCCTCC GCCGAGAACG GCGACAAGGT GACCGGCTAC GCCTACGCGC AACTGTTGTC CGCCCTGGCC AAGAAACAAG CCGGCTAG
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Protein sequence | MANPDPDKIT DEMWQLWTEC EQVISGVRLG GIWADKPGYH NTVDANQANW PDNYSIQLGL DLESPHTKAR AIDLTMSDAQ MRLHTGRLRA AALDGDPRLS AVREFYGTLD SQNVYGLIKD STTGSWRSSS SDSSHLWHIH ISVFTTFVND WDSLAPIVSV LADSEGDDDV IGLKKGNSGE RVKGLQAALG RAGYPVDVDG EYGPKTAAAL LEMRKDMGSS AENGDKVTGY AYAQLLSALA KKQAG
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