| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3874 |
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| Symbol | |
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| ID | 8885074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 4137436 |
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| End bp | 4140243 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003512622 |
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| Protein GI | 291301344 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.841165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCG TGGTACTTGG CAACGTCGAG GTCCACGGTG ACGACGGGCC GGTGGCCATC
GACGCCCACA AACAGCGGCT GCTGTTGGCC GTGCTCCTCA GCCGCGCCGG TCGCCCGATC
CCCTCCGACG CGCTGGTCGA GACGCTGTGG CACGGCAACC CGCCCTCGGC GGTGCGCAAG
GCGCTGAGCT GGCATGTGCT GAAGTTGCGC GAGGCACTGG GTGACCGGGA GCGGGTACGG
TTCCGGTCCG GCGGGTATGT GCTGGCCGCC GAGCCGGACG AGGTGGACGC GCGACGATTC
GAGCGGCTGT ACCGGGAGGC GCTGGCCGGT GCCGGTTCCG ATCCGCGCGC CGCCGCCCGG
ACGCTGGCGC GGGCGTCGGA GCTGTGGCGC GGGAACAACG CCTACGGCGA TCTGGCCGAC
GTCGGGGAGC TGCGGGACGA GTCGAACCGG CTCAACGAAC TGCGGCTGGC CATGCTGGAC
AAACGGTACG AACTGGAACT GGCGCTGGGG CGGCACGACG AGAGCGTCCC GGCGCTGCGG
GCGCTGGTGG CCGAGTACCC GTACACCGAG GTCTTCCGGG CGCACCTGAT GCTCGCGCTG
TACCGCGGCG GGCGCCGGGC CGAGGCGCTG CGGGTGTACC GCGAGGCGCG TGAGCTGCTG
GTCGGTGACC TGGGCTTGGA GCCGGGTGAG CGGTTGCGGC GGCTGCACGA GGACATCCGG
GCCTCGGCGG CCTCGCTGGA TCTGGGCGCC GACGCGACGG CCGTGGCGGC GGCTCCGATC
GCCGAGCTGC CCGCCAACAT CTCCACTTTC ACCGGACGCG ACGGGGAGGT CACCGAGCTG
CTGGAGTGGT TGCGGCCCGG CGATCGCGAC TCCCCCGTCA CCGCGGTGGT GTCGGGCGGC
GGCGGGGTCG GCAAGTCGGC GCTCGCGGTG CGGGTGGCGC ACCGGCTGGC CGCGCGGTAC
CCGGACGGGC AGCTGTACCT GAACCTGCAC GGCAACACCC CGGACGTGAA GCCGCTGGCG
CACGCCGAGG CGCTGTCGCG GGTGCTGCGC TCGCTGTCGG TGGCGCCGCC GCCGGGTGGG
CATGACGTGG ACGAGTTGGC CGGGCTGTTC CGCACCGCGA CGGCGGGGCA GCGGATGCTG
TTCCTGTTCG ACGACGCCCG CGACGCCGCG CAGCTGCGGC CGCTGTTGCC GTCGGGCAAA
CACTGTGGCG TCATCGTCAC CAGTCGCGAT CCACTGTACT CACTGGACGA TGTCCGGCAC
CTGGAGCTGG AACCGTTGGG CCCGGCGGAT TCGGCCGCGC TGTTCCGGCG GCTGCTGCCG
GGCCGCCGCC TCGCCGACGA ACCGGTGGCG GCCGACCGGA TCGTGGAGCT GTGCGCGAGT
CTGCCGCTGG CGCTGTGCAT CGCGGCGGCC CGGATCAACT CGCGACCCCG CTGGCCGCTG
GCGGACTTCG CCGAGCGGCT GGCCGACAGC GACCGGCGAC TGTCCGAACT GGCCATCGAC
GACCGGGCGG TACGGGCCAG TTTCGCCACC AGCTACGAGG ACCTGGACGC GATGCAGTCA
CGGCTGTTCC GGCTGTCGAG CCTGCTGGAG TCGCCGGACT TCACCGTCGA GCTGGCCGCC
GCCGCGCTGG ACTGGCGCGC CGAGGCGACC GAGGAACTGC TGGACGACCT GGTGACCTTC
CACCTCGTCG ACTCCCCCAC CCCGGGCCGC TACCGGATGC ACGACCTGAT CCGGCTGTAC
GCGCGCGAAC GCGCCGAGAC CGACGAACCG GCCGCCGACC GCGACGCCGC GCTGCGCCGG
GTGTTCCTCC GGCTCGCCGC GGCCACCCGC TCGGCGCTGC TGGCGGTGCA GCCGCTGGCC
GAATGGCGCC TGGCCATCGG CCTGGACGAG GACGCGACCG GACCGTCGTT CGCCGATGCC
GCCGAGGCCG AGACGTGGAT CGACGCCGAG GCCCAGAACC TCATCGCACT GTCCAAACAG
GCTTCCCGGG CACCCGACAC CGGCGCGGCG GCGGTCGCGA TCGCGGTGCG CACCTTCACC
GCCCTCATGC CCCGGGGACA CTGGCGCGAG TCGGTGGCGA TCGCCGAGGT GGCCGTCGCG
GCGGCCCGCA CGGCGGGTGA CCCCTATGGA CTCGCGGTCG CACTGCGCGA CCTGGGCCAG
GCCCAGCGCG CCATGAAGCT GCGGCCCGAG GCGACCACGA CCCTCACCGA GGCGCTCAAA
GTGTGTCGCG ACAACGGCTT CCACGAACGC GTGCCCGGCA TCCTGAACTT CCTGGCCGAC
GTGCACCGGC AGGAGGGCGA GTACGACACC GCGATCGGCC TGCTCCGCGA AGGACTGGCC
GCGTGCGACG AGCATGTCGC CGACGAACGC ATCGCCATCG AGATCAAGAA CGGCCTGCTC
ACTTCCCTGG GCTTCAACTA CGAGCAGACC GGCCAGTTCG ACCACGCCGC CGAAGCCCAT
CGGGAGGCGA TCGCCATCAG CCACGGCGAC CCGCCCGCCC ACGCCATCGC CCTGGGCAAC
CTCGCCCACG TGCTGCGCCG CCAAGGCGAA GCCACCCAGG CGATCCCGCT GCTGGAGGAA
GCCCTGCAAC TGCTGAACGA CAGCGGCAAC TCCCGCACCT TCGCCGCCGC CCACAAGCAC
TGGGTACTGG CGGACGCCAG CGACGATCTC GCCGACCCCG CGCGGGCTCG CGAGCACTGG
AACCTGGCCG CCGAGATCCT CGGCGAACTG AAGCTGATAA CCCTGGAGGA GGAAGCCGGA
ATCCGCTCCG CACCCCGTCC GGAAATGCCG CAGCCCCTAC GGTTCTGA
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| Protein sequence | MRFVVLGNVE VHGDDGPVAI DAHKQRLLLA VLLSRAGRPI PSDALVETLW HGNPPSAVRK
ALSWHVLKLR EALGDRERVR FRSGGYVLAA EPDEVDARRF ERLYREALAG AGSDPRAAAR
TLARASELWR GNNAYGDLAD VGELRDESNR LNELRLAMLD KRYELELALG RHDESVPALR
ALVAEYPYTE VFRAHLMLAL YRGGRRAEAL RVYREARELL VGDLGLEPGE RLRRLHEDIR
ASAASLDLGA DATAVAAAPI AELPANISTF TGRDGEVTEL LEWLRPGDRD SPVTAVVSGG
GGVGKSALAV RVAHRLAARY PDGQLYLNLH GNTPDVKPLA HAEALSRVLR SLSVAPPPGG
HDVDELAGLF RTATAGQRML FLFDDARDAA QLRPLLPSGK HCGVIVTSRD PLYSLDDVRH
LELEPLGPAD SAALFRRLLP GRRLADEPVA ADRIVELCAS LPLALCIAAA RINSRPRWPL
ADFAERLADS DRRLSELAID DRAVRASFAT SYEDLDAMQS RLFRLSSLLE SPDFTVELAA
AALDWRAEAT EELLDDLVTF HLVDSPTPGR YRMHDLIRLY ARERAETDEP AADRDAALRR
VFLRLAAATR SALLAVQPLA EWRLAIGLDE DATGPSFADA AEAETWIDAE AQNLIALSKQ
ASRAPDTGAA AVAIAVRTFT ALMPRGHWRE SVAIAEVAVA AARTAGDPYG LAVALRDLGQ
AQRAMKLRPE ATTTLTEALK VCRDNGFHER VPGILNFLAD VHRQEGEYDT AIGLLREGLA
ACDEHVADER IAIEIKNGLL TSLGFNYEQT GQFDHAAEAH REAIAISHGD PPAHAIALGN
LAHVLRRQGE ATQAIPLLEE ALQLLNDSGN SRTFAAAHKH WVLADASDDL ADPARAREHW
NLAAEILGEL KLITLEEEAG IRSAPRPEMP QPLRF
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