Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3874 |
Symbol | |
ID | 8885074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4137436 |
End bp | 4140243 |
Gene Length | 2808 bp |
Protein Length | 935 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, SARP family |
Protein accession | YP_003512622 |
Protein GI | 291301344 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.841165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCG TGGTACTTGG CAACGTCGAG GTCCACGGTG ACGACGGGCC GGTGGCCATC GACGCCCACA AACAGCGGCT GCTGTTGGCC GTGCTCCTCA GCCGCGCCGG TCGCCCGATC CCCTCCGACG CGCTGGTCGA GACGCTGTGG CACGGCAACC CGCCCTCGGC GGTGCGCAAG GCGCTGAGCT GGCATGTGCT GAAGTTGCGC GAGGCACTGG GTGACCGGGA GCGGGTACGG TTCCGGTCCG GCGGGTATGT GCTGGCCGCC GAGCCGGACG AGGTGGACGC GCGACGATTC GAGCGGCTGT ACCGGGAGGC GCTGGCCGGT GCCGGTTCCG ATCCGCGCGC CGCCGCCCGG ACGCTGGCGC GGGCGTCGGA GCTGTGGCGC GGGAACAACG CCTACGGCGA TCTGGCCGAC GTCGGGGAGC TGCGGGACGA GTCGAACCGG CTCAACGAAC TGCGGCTGGC CATGCTGGAC AAACGGTACG AACTGGAACT GGCGCTGGGG CGGCACGACG AGAGCGTCCC GGCGCTGCGG GCGCTGGTGG CCGAGTACCC GTACACCGAG GTCTTCCGGG CGCACCTGAT GCTCGCGCTG TACCGCGGCG GGCGCCGGGC CGAGGCGCTG CGGGTGTACC GCGAGGCGCG TGAGCTGCTG GTCGGTGACC TGGGCTTGGA GCCGGGTGAG CGGTTGCGGC GGCTGCACGA GGACATCCGG GCCTCGGCGG CCTCGCTGGA TCTGGGCGCC GACGCGACGG CCGTGGCGGC GGCTCCGATC GCCGAGCTGC CCGCCAACAT CTCCACTTTC ACCGGACGCG ACGGGGAGGT CACCGAGCTG CTGGAGTGGT TGCGGCCCGG CGATCGCGAC TCCCCCGTCA CCGCGGTGGT GTCGGGCGGC GGCGGGGTCG GCAAGTCGGC GCTCGCGGTG CGGGTGGCGC ACCGGCTGGC CGCGCGGTAC CCGGACGGGC AGCTGTACCT GAACCTGCAC GGCAACACCC CGGACGTGAA GCCGCTGGCG CACGCCGAGG CGCTGTCGCG GGTGCTGCGC TCGCTGTCGG TGGCGCCGCC GCCGGGTGGG CATGACGTGG ACGAGTTGGC CGGGCTGTTC CGCACCGCGA CGGCGGGGCA GCGGATGCTG TTCCTGTTCG ACGACGCCCG CGACGCCGCG CAGCTGCGGC CGCTGTTGCC GTCGGGCAAA CACTGTGGCG TCATCGTCAC CAGTCGCGAT CCACTGTACT CACTGGACGA TGTCCGGCAC CTGGAGCTGG AACCGTTGGG CCCGGCGGAT TCGGCCGCGC TGTTCCGGCG GCTGCTGCCG GGCCGCCGCC TCGCCGACGA ACCGGTGGCG GCCGACCGGA TCGTGGAGCT GTGCGCGAGT CTGCCGCTGG CGCTGTGCAT CGCGGCGGCC CGGATCAACT CGCGACCCCG CTGGCCGCTG GCGGACTTCG CCGAGCGGCT GGCCGACAGC GACCGGCGAC TGTCCGAACT GGCCATCGAC GACCGGGCGG TACGGGCCAG TTTCGCCACC AGCTACGAGG ACCTGGACGC GATGCAGTCA CGGCTGTTCC GGCTGTCGAG CCTGCTGGAG TCGCCGGACT TCACCGTCGA GCTGGCCGCC GCCGCGCTGG ACTGGCGCGC CGAGGCGACC GAGGAACTGC TGGACGACCT GGTGACCTTC CACCTCGTCG ACTCCCCCAC CCCGGGCCGC TACCGGATGC ACGACCTGAT CCGGCTGTAC GCGCGCGAAC GCGCCGAGAC CGACGAACCG GCCGCCGACC GCGACGCCGC GCTGCGCCGG GTGTTCCTCC GGCTCGCCGC GGCCACCCGC TCGGCGCTGC TGGCGGTGCA GCCGCTGGCC GAATGGCGCC TGGCCATCGG CCTGGACGAG GACGCGACCG GACCGTCGTT CGCCGATGCC GCCGAGGCCG AGACGTGGAT CGACGCCGAG GCCCAGAACC TCATCGCACT GTCCAAACAG GCTTCCCGGG CACCCGACAC CGGCGCGGCG GCGGTCGCGA TCGCGGTGCG CACCTTCACC GCCCTCATGC CCCGGGGACA CTGGCGCGAG TCGGTGGCGA TCGCCGAGGT GGCCGTCGCG GCGGCCCGCA CGGCGGGTGA CCCCTATGGA CTCGCGGTCG CACTGCGCGA CCTGGGCCAG GCCCAGCGCG CCATGAAGCT GCGGCCCGAG GCGACCACGA CCCTCACCGA GGCGCTCAAA GTGTGTCGCG ACAACGGCTT CCACGAACGC GTGCCCGGCA TCCTGAACTT CCTGGCCGAC GTGCACCGGC AGGAGGGCGA GTACGACACC GCGATCGGCC TGCTCCGCGA AGGACTGGCC GCGTGCGACG AGCATGTCGC CGACGAACGC ATCGCCATCG AGATCAAGAA CGGCCTGCTC ACTTCCCTGG GCTTCAACTA CGAGCAGACC GGCCAGTTCG ACCACGCCGC CGAAGCCCAT CGGGAGGCGA TCGCCATCAG CCACGGCGAC CCGCCCGCCC ACGCCATCGC CCTGGGCAAC CTCGCCCACG TGCTGCGCCG CCAAGGCGAA GCCACCCAGG CGATCCCGCT GCTGGAGGAA GCCCTGCAAC TGCTGAACGA CAGCGGCAAC TCCCGCACCT TCGCCGCCGC CCACAAGCAC TGGGTACTGG CGGACGCCAG CGACGATCTC GCCGACCCCG CGCGGGCTCG CGAGCACTGG AACCTGGCCG CCGAGATCCT CGGCGAACTG AAGCTGATAA CCCTGGAGGA GGAAGCCGGA ATCCGCTCCG CACCCCGTCC GGAAATGCCG CAGCCCCTAC GGTTCTGA
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Protein sequence | MRFVVLGNVE VHGDDGPVAI DAHKQRLLLA VLLSRAGRPI PSDALVETLW HGNPPSAVRK ALSWHVLKLR EALGDRERVR FRSGGYVLAA EPDEVDARRF ERLYREALAG AGSDPRAAAR TLARASELWR GNNAYGDLAD VGELRDESNR LNELRLAMLD KRYELELALG RHDESVPALR ALVAEYPYTE VFRAHLMLAL YRGGRRAEAL RVYREARELL VGDLGLEPGE RLRRLHEDIR ASAASLDLGA DATAVAAAPI AELPANISTF TGRDGEVTEL LEWLRPGDRD SPVTAVVSGG GGVGKSALAV RVAHRLAARY PDGQLYLNLH GNTPDVKPLA HAEALSRVLR SLSVAPPPGG HDVDELAGLF RTATAGQRML FLFDDARDAA QLRPLLPSGK HCGVIVTSRD PLYSLDDVRH LELEPLGPAD SAALFRRLLP GRRLADEPVA ADRIVELCAS LPLALCIAAA RINSRPRWPL ADFAERLADS DRRLSELAID DRAVRASFAT SYEDLDAMQS RLFRLSSLLE SPDFTVELAA AALDWRAEAT EELLDDLVTF HLVDSPTPGR YRMHDLIRLY ARERAETDEP AADRDAALRR VFLRLAAATR SALLAVQPLA EWRLAIGLDE DATGPSFADA AEAETWIDAE AQNLIALSKQ ASRAPDTGAA AVAIAVRTFT ALMPRGHWRE SVAIAEVAVA AARTAGDPYG LAVALRDLGQ AQRAMKLRPE ATTTLTEALK VCRDNGFHER VPGILNFLAD VHRQEGEYDT AIGLLREGLA ACDEHVADER IAIEIKNGLL TSLGFNYEQT GQFDHAAEAH REAIAISHGD PPAHAIALGN LAHVLRRQGE ATQAIPLLEE ALQLLNDSGN SRTFAAAHKH WVLADASDDL ADPARAREHW NLAAEILGEL KLITLEEEAG IRSAPRPEMP QPLRF
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