Gene Snas_3847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3847 
Symbol 
ID8885047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4107476 
End bp4108030 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_003512596 
Protein GI291301318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA TATCGCTCGA ACCGCCCCGC ACGCTCACCA ACCGGCTGGT GTCCTGGTAC 
TCCAAGCGCA AGTTCGGCCG CGACCTGGGC CCGACCCTGG CGGCCGGGCA CAACCGCCGG
GTGCTGATGA CCATGGGCAA GGTGGAGATG GGTTCGGCGA AGTGGAACGC GCTGGACCCG
CAGCTGAAGA TCATGGTCAC CATGAAGGCC GCGATGACCA TCGGCTGCGA GTGGTGCGTC
GACTTCAGCT ACTGGCTCGG CCGGGAGGCC GGACTGGACG CGGACAAGAT CCACGCCGTC
CCCGGCTGGC GGAACTCGAC GCTGTTCACG CCGCTGGAGC GGCTGGCGCT GGAGTACGCC
GAGGCGATGA GCACCACACC GGTGACCGTC ACCGACGAGC TGGTCGCCGG TCTGGGCGAA
CATCTCGACG ACGCCCAGCT GGTGGAGCTG ACCGCGACCA TCGCGCTGGA GAACCTGTAC
GGCCGCAACA ACCTGGCCCT GGGGCTGGCA CCCGAGGGAC TCAAGGAAGA ATGCGCGCTG
CCCGCCCGCG ACTGA
 
Protein sequence
MARISLEPPR TLTNRLVSWY SKRKFGRDLG PTLAAGHNRR VLMTMGKVEM GSAKWNALDP 
QLKIMVTMKA AMTIGCEWCV DFSYWLGREA GLDADKIHAV PGWRNSTLFT PLERLALEYA
EAMSTTPVTV TDELVAGLGE HLDDAQLVEL TATIALENLY GRNNLALGLA PEGLKEECAL
PARD