| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3806 |
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| Symbol | |
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| ID | 8885006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4059135 |
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| End bp | 4060601 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | glutamate synthase NADH/NADPH, small subunit |
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| Protein accession | YP_003512555 |
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| Protein GI | 291301277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.319112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00341242 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGACC CCAACGGTTT CCTGCGACAC GTCCGCGAAC TGCCGCCGCG CCGTCCGGTG
CCGCTGCGGC TCATGGACTG GCGCGAGGTC TACCAGCAGT CCGACGAGAC CAAGCTGCGC
GAGCAGGCCT CGCGGTGCAT GGACTGCGGC ATCCCGTTCT GCCACAACGG CTGCCCGCTG
GGCAACCGGA TCCCGGAGTG GAACGACCTG GTGCGCACCG GCCGCTTCGA CGCCGCGTCC
GAACAACTCC ACGCCACCAA CAACTTCCCG GAGTTCACCG GCAAACTGTG CCCGGCGCCG
TGCGAGTCCG CGTGTGTCCT GGGCATCGCC GACGACGCCG TCACGATCAA GCAGGTCGAG
GCCGACATCG CCGAGCGGGC CTTCGCCGAC GGCAACGTCA CGCCGCAGCC GATCCCGGAA
CCGACCGGCA AGTCGGTGGC CGTGGTGGGT TCGGGCCCGG CCGGGCTGGC CGCCGCCCAG
CAGCTGGCGC GTGCCGGTCA CGCCGTCACC GTCTACGAAC GCGACGACGC CATCGGCGGT
CTGATGCGGT ACGGCATCCC CGACTTCAAA CTCGAGAAGC GGCACATCGA CCGCAGACTG
GAGCAGCTGC GCGCCGAGGG CGTCCAGTTC GTCGTCAACT GCGAGATCGG CGTGTCCATC
TCGATGCGGG AACTGCGGTA CCGCCACGAC GCGATCCTGC TGGCGGTCGG CGCCCTGGCC
GGACGCGACA CCGACGTCCC CGGCCGGGAC CTCGCCGGGG TGCACATGGC CATGGACCAC
CTCGTGGGCG CCAACCGGGT CGTGGCCGGG CGGGCGCCGT TCGCGCCCAT CGACGCGCGC
GGCAAACACG TCGTCATCAT CGGCGGCGGC GACACCGCCG CCGACTGCCT CGGTGTCGCG
CACCGGCAGG GCGCGGCCTC GGTGACCCAG CTGGACCTGT ACCCGGAGCC GCCGAAGCAG
CGCGACGCCG AGCGCGACCC GTGGCCCAGC TGGCCCAACC TGCTGCGCGA CTACCCGGCG
CACGAGGAGG GCGGCGAGCG GGTGTTCGCC CACGCCGCGT TCGAGTTCCT CGGCGACGAG
GCCGGGCACG TGCGCACCAT GCGCGTCAGC GAGGTCACCG TCGACAAGAC CGGCGGCCGC
CGGGTGGTGA ACCAGGTGCC GGGTTCACAG CGCGACATCC CCGCCGACCT GGTGCTGCTG
GCGATCGGTT TCGCGGGCAG CGAGGAGCAG CCGCTGCTGC GCCAGGCCGG GCTGGAACTG
TCGGGCGGTG TCTACGAGTG CGCCCCGGAC TGGCAGACCG ACGCCGAGGG CGTCTTCGTC
GCCGGTGACG CCCACAGGGG AGCGTCGCTG ATCGTGTGGG CGATCGCGGA GGGACGTGCC
GCCGCGGCGG CCATCCACGG CTACCTCGGC TTCGCGACAC CCCTCCCGGC ACCGGTGGAA
CCCGACAGTG TGCCCTTGAC CGCGTGA
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| Protein sequence | MADPNGFLRH VRELPPRRPV PLRLMDWREV YQQSDETKLR EQASRCMDCG IPFCHNGCPL
GNRIPEWNDL VRTGRFDAAS EQLHATNNFP EFTGKLCPAP CESACVLGIA DDAVTIKQVE
ADIAERAFAD GNVTPQPIPE PTGKSVAVVG SGPAGLAAAQ QLARAGHAVT VYERDDAIGG
LMRYGIPDFK LEKRHIDRRL EQLRAEGVQF VVNCEIGVSI SMRELRYRHD AILLAVGALA
GRDTDVPGRD LAGVHMAMDH LVGANRVVAG RAPFAPIDAR GKHVVIIGGG DTAADCLGVA
HRQGAASVTQ LDLYPEPPKQ RDAERDPWPS WPNLLRDYPA HEEGGERVFA HAAFEFLGDE
AGHVRTMRVS EVTVDKTGGR RVVNQVPGSQ RDIPADLVLL AIGFAGSEEQ PLLRQAGLEL
SGGVYECAPD WQTDAEGVFV AGDAHRGASL IVWAIAEGRA AAAAIHGYLG FATPLPAPVE
PDSVPLTA
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