Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3788 |
Symbol | |
ID | 8884988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4044802 |
End bp | 4045251 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | membrane protein-like protein |
Protein accession | YP_003512538 |
Protein GI | 291301260 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.739425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00349286 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCTCG TCCTGCTGTC GATCCACGTG GTGGCCAGCA TCGTCTTCGT GGGCGGCTCG GCCGTGGCCG CGAGCCTGTT CCCGCGCTAC GCCCCGGTCC TGCCCGAAAC CGATGCGGGC GAACGCAATC CGGCGACCGC GAGACTGCTG CACCGCATCA CCGGAGGGTA CGCCGCCGTC GGCCTGATCG TCCCGATCGC CGGGATCGCG CTGGCGACCC TGCAGGACCG GATGGGCGAA ATCTGGATCA CCGTCGCGAT GGGACTGACC GCCGCGGCGG CACTGCTGTT GGCCGTGCAG ATCCATCCCC GGCAGCGCGA GGCCCTCAAG ACCCCCGACG ACGGCCGCCA GCTGCGCACC CTGGCGATGC TCGCCGGGAT CTACAACGTC CTGTGGGTCA TCGTCGTGGT GCTCATGATC GTGCGTCCCG GGGCCGCCCC GTCGGCGTGA
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Protein sequence | MNLVLLSIHV VASIVFVGGS AVAASLFPRY APVLPETDAG ERNPATARLL HRITGGYAAV GLIVPIAGIA LATLQDRMGE IWITVAMGLT AAAALLLAVQ IHPRQREALK TPDDGRQLRT LAMLAGIYNV LWVIVVVLMI VRPGAAPSA
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