Gene Snas_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3780 
Symbol 
ID8884980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4035483 
End bp4036481 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512530 
Protein GI291301252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.609948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00315087 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACATCT CGCTACTCGT CATCGTCGCC GGCGTACTCG TCGGCCTGTC GGTCGGACTG 
ACCGGAATGG GCGGTGGTGC CCTGATGACG CCCATCATGG TGCTGGTCTT CGGGGTCAAC
CCCACCGCCG CGGTCGGCAG CGACCTGACC GCCTCGGTGG CCATGAAACC CGTCGGGGCC
GTCGTTCACC ACCGGGCCGG AACGGTCCGC TGGGATCTCG TCAGATGGTT GCTGCCCACC
GCGATACCCG CCGGTTTCGC CGGGGCCTGG CTGATCAGCC TGCTCGGCGA CGGGAAGGCC
GTGCAGGACG GACTCAAACT CATCATCGGC GCGGCACTGC TGCTGGCCGT CGTGGGAATG
TTCGCCCGGA TCATCCTGTC CCGGCGGCGC GGCACCGCGA CCACCGACGG ACCGACTCGC
ATCAAGCCGG TACCGGCGCT GCTCATCGGC GTGGTCGGCG GCCTGATCGT CGGTGTGACC
TCGGTGGGCT CCGGATCACT GATCATCGTG CTGCTGATGC TGACCCACCC GAGGCTGCGC
GCCAACGAAC TCGTGGGCAC CGACCTGGTG CAGGCCATCC CGCTGGTGGC CTCGGCCGCG
CTGGGGCACT GGATCTTCGG GGACACCCAG CTGGCGCTGG CCGGAACCGT CCTGTTGGGA
GCCATCCCCG GCATCTACGT CGGCGCGAAA CTGTCGGCCC GGGCGCCGGA GTCGATCCTG
CGCTGGGCCC TGGCGGTGCT GCTGCTCGGC TCGGGCATGG CGCTGTGGGA CGTGCCGGGC
GTCGTGACGC TGCTGGCCTG CGCCGCGCTC GTGGGCATCG CCGTGGCCGC CCACTTCATC
GGACGCGCCG GTGACCGTGA ACCCGTCGGC CTCACCGGCG ACGATGACGC CGCCGAGCGC
GAACCGCGGC CGGTGGCCAC GAGCCGGTCA GCCGCCGATG GCACCGCCGA GGCGGAACCG
CAACCGGCGG CCACCGGCAC CTCGACGCCC ACCAGCTAG
 
Protein sequence
MDISLLVIVA GVLVGLSVGL TGMGGGALMT PIMVLVFGVN PTAAVGSDLT ASVAMKPVGA 
VVHHRAGTVR WDLVRWLLPT AIPAGFAGAW LISLLGDGKA VQDGLKLIIG AALLLAVVGM
FARIILSRRR GTATTDGPTR IKPVPALLIG VVGGLIVGVT SVGSGSLIIV LLMLTHPRLR
ANELVGTDLV QAIPLVASAA LGHWIFGDTQ LALAGTVLLG AIPGIYVGAK LSARAPESIL
RWALAVLLLG SGMALWDVPG VVTLLACAAL VGIAVAAHFI GRAGDREPVG LTGDDDAAER
EPRPVATSRS AADGTAEAEP QPAATGTSTP TS