Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3780 |
Symbol | |
ID | 8884980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4035483 |
End bp | 4036481 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003512530 |
Protein GI | 291301252 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.609948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00315087 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACATCT CGCTACTCGT CATCGTCGCC GGCGTACTCG TCGGCCTGTC GGTCGGACTG ACCGGAATGG GCGGTGGTGC CCTGATGACG CCCATCATGG TGCTGGTCTT CGGGGTCAAC CCCACCGCCG CGGTCGGCAG CGACCTGACC GCCTCGGTGG CCATGAAACC CGTCGGGGCC GTCGTTCACC ACCGGGCCGG AACGGTCCGC TGGGATCTCG TCAGATGGTT GCTGCCCACC GCGATACCCG CCGGTTTCGC CGGGGCCTGG CTGATCAGCC TGCTCGGCGA CGGGAAGGCC GTGCAGGACG GACTCAAACT CATCATCGGC GCGGCACTGC TGCTGGCCGT CGTGGGAATG TTCGCCCGGA TCATCCTGTC CCGGCGGCGC GGCACCGCGA CCACCGACGG ACCGACTCGC ATCAAGCCGG TACCGGCGCT GCTCATCGGC GTGGTCGGCG GCCTGATCGT CGGTGTGACC TCGGTGGGCT CCGGATCACT GATCATCGTG CTGCTGATGC TGACCCACCC GAGGCTGCGC GCCAACGAAC TCGTGGGCAC CGACCTGGTG CAGGCCATCC CGCTGGTGGC CTCGGCCGCG CTGGGGCACT GGATCTTCGG GGACACCCAG CTGGCGCTGG CCGGAACCGT CCTGTTGGGA GCCATCCCCG GCATCTACGT CGGCGCGAAA CTGTCGGCCC GGGCGCCGGA GTCGATCCTG CGCTGGGCCC TGGCGGTGCT GCTGCTCGGC TCGGGCATGG CGCTGTGGGA CGTGCCGGGC GTCGTGACGC TGCTGGCCTG CGCCGCGCTC GTGGGCATCG CCGTGGCCGC CCACTTCATC GGACGCGCCG GTGACCGTGA ACCCGTCGGC CTCACCGGCG ACGATGACGC CGCCGAGCGC GAACCGCGGC CGGTGGCCAC GAGCCGGTCA GCCGCCGATG GCACCGCCGA GGCGGAACCG CAACCGGCGG CCACCGGCAC CTCGACGCCC ACCAGCTAG
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Protein sequence | MDISLLVIVA GVLVGLSVGL TGMGGGALMT PIMVLVFGVN PTAAVGSDLT ASVAMKPVGA VVHHRAGTVR WDLVRWLLPT AIPAGFAGAW LISLLGDGKA VQDGLKLIIG AALLLAVVGM FARIILSRRR GTATTDGPTR IKPVPALLIG VVGGLIVGVT SVGSGSLIIV LLMLTHPRLR ANELVGTDLV QAIPLVASAA LGHWIFGDTQ LALAGTVLLG AIPGIYVGAK LSARAPESIL RWALAVLLLG SGMALWDVPG VVTLLACAAL VGIAVAAHFI GRAGDREPVG LTGDDDAAER EPRPVATSRS AADGTAEAEP QPAATGTSTP TS
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