| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3774 |
|---|
| Symbol | |
|---|
| ID | 8884973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4028581 |
|---|
| End bp | 4029726 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_003512524 |
|---|
| Protein GI | 291301246 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.247062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0123225 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGA ATCGGAGAGT TTGGCGGGTG TTGGCGTCCG CCGCGGCGAT GGCGACGGTA
GTCGGTGCCA TGGCGGCGTG TGGTAATCCG AATGACAGTG CGTCGGGCGA TTGTGAGTAC
GCGATCGCGT CGATGGGTGC GTTGACCGGA CCGAACGCGG GGCTTGGTGA GGTCATGCGT
GACGGTGCGA AGGTCGCTGT CGAGATCTAC AACGAGAAGA ACAAGGACGC GCAGGTGTGC
TTCGAGGAGT TCGACTCCAA GGGCACCGAG AAGGACGCGC CCGGTGTGGC GAAGAAGATC
GCCAAGGACA AGAAGATCCT GGGCGTCGTC GGGCCGGGCT TCTCCGGTGA GTCGACCGCC
GCGAACCCGA TCTTCGAAGA GGCCGGAATG CCGATCATCT CGGGTTCGGC CACGGCTCCG
GAGCTGGCCG AGAAGGGCTG GAAGGTCTTC CACCGCACCA TCGGCAACGA CGCGGTGCAG
GGTCCGGCCG TGGCGTCGTA CATCAACGAC GTCCTCAAGG CCAAGAAGGT CTTCGTGATC
GACGACCAGA CCGCCTACGG TGAGGGCCTG GCCAAGACCC TGAAGGACGC CCTGGGCGAC
AAGCTCGCGG GCGAGGAGCA GGTCAAGACC GACCAGAAGG AGTTCGCTCC GGTCATCAAC
AAGCTGAAGG ACTCCAAGGC CGACGCGGTG TTCTACAGTG GCTACTACCC CGAGGGTGGT
CCGTTCCTGA ACCAGATGAA GAAGGCCGGA GTCGAGGCCC AGTTCATCGG TCCCGACGGT
GTCAAGGACG AGAACTTCAT CGAGGCGGCC AAGGACGCTT CCGAGGGTGC CATCATCACC
TGCCCGTGCA TCCCCGGTGA GAAGGCCGAA GGCGACTTCG CCAAGGAGTT CGAGAAGCGC
ATCGGTGAGG CCCCGGGTAC CTACGGTGCC GAGGCCTTCG ACGCGGCCAA CGTGTTCCTC
GACGGCATCA AGGATGGCGT GAAGGACACC AAGAGCATGC TGGACTTCGT CAACAAGTAC
GACAAGGCTG GCGCCAGCAA GCACATCAAG TTCGACAAGG ACGGCAACAT CGCCGTCGAC
GTTGTCTGGG CCTACAAGGT CGAGGACGGC AAGATCGTCG CTGACCAGGA GATCGAGCTC
AAGTAG
|
|---|
| Protein sequence | MTVNRRVWRV LASAAAMATV VGAMAACGNP NDSASGDCEY AIASMGALTG PNAGLGEVMR
DGAKVAVEIY NEKNKDAQVC FEEFDSKGTE KDAPGVAKKI AKDKKILGVV GPGFSGESTA
ANPIFEEAGM PIISGSATAP ELAEKGWKVF HRTIGNDAVQ GPAVASYIND VLKAKKVFVI
DDQTAYGEGL AKTLKDALGD KLAGEEQVKT DQKEFAPVIN KLKDSKADAV FYSGYYPEGG
PFLNQMKKAG VEAQFIGPDG VKDENFIEAA KDASEGAIIT CPCIPGEKAE GDFAKEFEKR
IGEAPGTYGA EAFDAANVFL DGIKDGVKDT KSMLDFVNKY DKAGASKHIK FDKDGNIAVD
VVWAYKVEDG KIVADQEIEL K
|
|---|
| |