Gene Snas_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3728 
Symbol 
ID8884927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand+ 
Start bp3972894 
End bp3973454 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512478 
Protein GI291301200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.882683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.108943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAA GCCACCTGCG GCTGATAGCC ACAGTGGCGG TCATCGCCGC CGCCGCGCTG 
ACCGGTGTGG TCACCGGCCT GCTGGGGGCC ACCGGCACAT CCACCCTCGC GATCCCGGTG 
GCAGCGGCCG GTTTCGGCGG CGCGCTGATC GCCGGTGCCG TCGTGGTGGG CCTGCTGGGC 
GGACGGTTGA AGCCCCTCGC GGCGCCCGCG GCCGCCGCCG CACCGGCGCC CGCCCCCGAC 
TCGGCGGCGC TGGCGGCCAT CGACCAGCTC AACACCGAAC GCCGCACCCT CATCGACACC 
TGCATCTACG TGCGGGACCG CGCCACCAGC CAGGCCATCT CCGACAAGAT CGGCGCCGGG 
CTCACCCAGG CCGGTGTGGC CACGGTGTCG CCGGTGGGCG AGCGCTTCGA CCCCACCCGT 
CACGAGGCCG GCGGCACCAC TCCGGCCGCC GACGCCAGCC ACGACGGCCT GATCGCGGCG 
GTCGAGACCG TCGGCTACGC CGACCGCACC GCGGTGCTGC GCAACCCGAT CGTCACCGTC 
TACCGCAACG GAGGTGCCTG A
 
Protein sequence
MSTSHLRLIA TVAVIAAAAL TGVVTGLLGA TGTSTLAIPV AAAGFGGALI AGAVVVGLLG 
GRLKPLAAPA AAAAPAPAPD SAALAAIDQL NTERRTLIDT CIYVRDRATS QAISDKIGAG 
LTQAGVATVS PVGERFDPTR HEAGGTTPAA DASHDGLIAA VETVGYADRT AVLRNPIVTV 
YRNGGA