| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3695 |
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| Symbol | |
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| ID | 8884894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3931024 |
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| End bp | 3932598 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003512445 |
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| Protein GI | 291301167 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.660519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.194739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG ACACGGACTG GGCCAAACGG GCCCTTATCT ACCAGGTGTA CGTGCGCAGC
TTCGCCGATT CCGACGGCGA CGGTCTCGGC GACCTGGCCG GAGTCCGTTC CCGGCTCGAC
CACATCGCCG CACTCGGGGC CGACGCCATC TGGCTCACCC CGTTCTACCC TTCCCCCATG
GTGGACGGAG GCTACGACGT CGCCGACTAC CGCGACGTCG ACCCCCGCCT GGGCACCCTC
GCCGACTTCG ACGCGCTGCT GAGCGCGGCC CACGATTGCG GCATCCGCGT CATCACCGAC
ATCGTCCCCA ACCACACCTC CCACCAGCAC CCCTGGTTCC GGCAGGCACT CACGGCGCGA
CCGGGGTCCA GCGCCCGCGC CCGCTACATC TTCCGCCCCG GCCGGGGCCC CGACAGCGTC
GAGCCGCCCA ACAACTGGCA GTCCGTGTTC GGCGGTCCAG CATGGACCAG ACTGCCCGAC
GGCGACTGGT ACCTCCACCT GTTCGCACCC GAACAACCCG ACCTGAACTG GGACAGCACC
GAAGTCCGCG CCGAATTCGT CGACGTGCTC CGATTCTGGC TCGACCGTGG CGTGGACGGA
ATCCGCGTCG ACGTCGCGCA CGGCTTGGTG AAACCCGCCG GATTGCCCGA CGCCACCGTC
GCCGGAGTCA GCGGCAACCG CCCGTACTTC GACCAGGACG GGGTCCACGA GATCTACCGC
GAATGGCGCA AGGTCCTCGA CTCCTACGCA CCGACCCGGA TCATGGTCGC CGAAGCACGG
CTGCGCGACA CCGTCCGCAC CGCCCGATAC GTCCGTCCCG ACGAGATGGA CCAGGCGTTC
AACTTCGAGT TCCTGTGGGC GCCATGGTCA CTCGAACGAA TCCGCGACGC GATCTCCCGT
TCCCTGACGG CGATGAACCA CGTCGGCAGG TCACCCACCT GGGTCATCGG CAACCACGAC
GAGATCCGAG TAGCGAGCCG CCTGGCCGCA GACGTGCGCT CAAGCGCCGT CGGTCTGCGT
CGCGCCCGCG CGATGGCGCT GCTCAGCCTC GCACTACCGG GTTCCGCATA CATCTACCAA
GGCGACGAGC TCGGCCTCCC GCAAGCACCG GACCTCGCCC CGGAGTTCCA CGAAGACCCG
AAGCGACGCC GGTCAGCCGA ACCACGCGCG AGCCGCGACG AATGCCGTAT ACCGATGCCC
TGGCACGGCG ACCGACCCCC TTTCGGGTTC GGCCCGGACG ACTCGACCAC GCCCTGGCTG
CCCCAACCCG AAGCATGGGC CCGACTCACC GTCGCCGCCC AGCAGCACGA CCCAGACTCA
ACACTGACGA TGTACCAACA AGCGACCCGA CTCCGGCAGA CCGACAGCGA CCTCACCGGC
GACGACTTCG CCTGGAAGCC CGCACCCTCC GGCGTACTAG CGTTCACTCG AGGGCAACGA
TTCACGTGCG CGGTCAACTT CGGCCCCACG GCAGTGCCAC TGGATCAACT CAACCTGCCG
GAAAACCCGC TACTGTGCAG CACCCCCATC GACGACGACG CCCTACCGGC GAACGCCGCG
ATCTGGAGCC GCTGA
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| Protein sequence | MTSDTDWAKR ALIYQVYVRS FADSDGDGLG DLAGVRSRLD HIAALGADAI WLTPFYPSPM
VDGGYDVADY RDVDPRLGTL ADFDALLSAA HDCGIRVITD IVPNHTSHQH PWFRQALTAR
PGSSARARYI FRPGRGPDSV EPPNNWQSVF GGPAWTRLPD GDWYLHLFAP EQPDLNWDST
EVRAEFVDVL RFWLDRGVDG IRVDVAHGLV KPAGLPDATV AGVSGNRPYF DQDGVHEIYR
EWRKVLDSYA PTRIMVAEAR LRDTVRTARY VRPDEMDQAF NFEFLWAPWS LERIRDAISR
SLTAMNHVGR SPTWVIGNHD EIRVASRLAA DVRSSAVGLR RARAMALLSL ALPGSAYIYQ
GDELGLPQAP DLAPEFHEDP KRRRSAEPRA SRDECRIPMP WHGDRPPFGF GPDDSTTPWL
PQPEAWARLT VAAQQHDPDS TLTMYQQATR LRQTDSDLTG DDFAWKPAPS GVLAFTRGQR
FTCAVNFGPT AVPLDQLNLP ENPLLCSTPI DDDALPANAA IWSR
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