| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3684 |
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| Symbol | |
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| ID | 8884883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3916122 |
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| End bp | 3918914 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003512434 |
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| Protein GI | 291301156 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.270983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAG GAAGACGTTT GCCTACAGTA GATATTCGGT TGCTCGACGG CGTCGAAATG
CTGCGCGACG GGGTTTCGGT CGCGGCCGGG TATCCGCGAC AGCGGATGGT GCTGGCGGCC
CTGGCCGTCG AGGTGGGGCG GGTGGTCCGC CCGGAGACAC TCATGGCACG CATCTGGGAC
GGCCCCGTGC CGGAGTCGGC GGTCAATTCC GTGCAGAGCT ACATATCCCG GTTGCGGAAG
CTGTTCGAAG GCGTCGAGGG GACGAACATC GAGCGCAGGT TCGGCGGATA CGTCCTGGCC
ACCGAGCCGG AGACGGTGGA CCTGCACCGG TCGCGGAACC TGATCGCAAA AGCCAGAGCT
ACTGTGGACG ACGATGTGGC CGATCGCTTG TACGGTGAGG CGCTCGGCTT GTGGCGCGGC
GAGGCGTTCG CGGGGTGCGG CACGGCCTGG TTCGACGGCG TCCGCGCCAG CCTGGCGGCC
GAGTTCCATC GGGCCGGGCT CGACCACAAC GACGTGCTGC TTCGGTTGGG ACGGCACGAC
GAACTGGTCA CCGTGCTGCC CGACTCCGTG CGTGGCCACC CCTTCGATGA GCGGCTGACC
GGTCAGCTCA TGCTCGCCCT GTTCCAAGCC GGACGGCAGA CCGAAGCACT GGAACACTAT
GCCCGGCTGC GTGACCGGCT GGTCGAGCAG CTGGGCAACG ATCCCGGACC TGAACTGCGC
GAAGTGCATC GCCGGATCCT CGTCGGTGAC GCGTCCACTC CGAAGCCGAT GACCGTCACG
GGGCCGGTGC CCCGCCAGCT GCCCGGCGCG CCACGGCTGT TCACCGGGCG AGACAAGGAG
ATCGGCCGAC TCGACGACGG CCACGACGCT GACGCCGCAC CGGTTTGGGT GATCTCGGGG
CCGGGCGGTA TCGGCAAGAC CTGGCTGGCG CTGCACTGGG CGAACCAGCG CCTGGACCAC
TTCCCGGACG GGCAGCTGTA CGTGAACCTC CACGGTTTCC ACCCCACCGA GGAACCGGTG
CCCGCTGCCG CGGCGCTGAA TCAGGCACTC GAAGCCCTGG GGGTGCCCGC GACTGCGATT
CCCGCCGACA CCGAGGCACG CGCCGGGAAG TATCGCAGTC TGGTGGCGGG CAAGCGAATG
CTGGTGCTGC TTGACAACGC CCGCGACGGC GAGCAGGTGC TGCCGTTGCT GCCGGGCGGC
GGCTGCTGCA CCACGCTGAT AACCAGCCGT CGCGATCTTC CCGGCCTCGG CGCCGCCCAC
GGCGCACGAT CACTGCGACT GGGCACATTG GATGACGGCC AGTCGTGGCA GGCCCTGGCA
CGTCATCTCG GCGAACAGCG GCTCGCCGAA CAGCCCGCCG CCGTCACCGA ACTCATCGAG
CGTTGCGAAG GGCTGCCGCT GGCCCTGGGC ATCATCGGCG CCCGGGCGGC CGCCCATGAC
GATTTCCCAC TGACGGCCCT GGCCGAGGAG CTGCGGGAGC GCGCCGACCG GCTGGACATG
ATGGACAGCG GTGAACTGGT CGTCGGCCTG CGAGCGGTCT TCGACGGGTC CTACCGGACC
CTCGCATCGG ACGAAGCCCA GCTGTTCGCA TGGCTCGGGT CGGTCGACGG GCGCGATATC
GGGCTGCACG CCGCGGCCAG CCTCGCAGGC CTGCCGATCG GTCGTACCCG GATGCTGTTG
CGGGGTTTGG AGACCGCCAA CCTGATAGAG CAGCACACAC CCGGCCGCTA CCGCATGCAC
GACCTCACCC GGTTGTACGC GGCGGAACGC TCCAACGCCG ATCCCGCCGC GCTGCGCCGA
CTCGTCGTCC ACTATCTGCA CACCGCCACC AGAATGGACG AACTGTGTCT GCCAGACAGG
TACCGGGACG ACCATGACCC CGGCGAACTG GTCGAGGGCT GTCTTCCGGC TCCATTGGAT
GACCCGCAGC GGGCCCGACG GTGGCTGAGC CTTGAGCGCG CCAACATCCT GTCCGTGCAG
GGCATCGCAC TTGAACAGGG CTGGTATGAC AAGGTGTGGC GGTTGGCGTG GTGTTCCACC
ATGGTTCTTT GGAACCTCAA CTACGCTGAT GACGCGCTGC TCGTCTGGCA GAACGCCACC
GCGGCCGCCG AGCGACTCGG TGAACCCCGC GTGGACGCGA TCGTCGCGGC TTTCCTTGGA
CGTGCGTTCA ACCGCGTGGG CCGAGTGAAG GATGGCATTC GGCACATGAG CGTCGCACTG
CGAGGTTTCG AGACGATCGG CGACCGTCCA CATCAGTGTA TTATCCGGAT CCACATCGCC
CGATGCCATA CGCGGTTGGG CAACGTGCGC CAAGCGCTGT CTGTCGTCCA GCGGGCCGCG
CGGCTACCCA AGGACGAAGT ACCTCCGATC GAGTTCGCGA GTGCCCTCAA CGCCGTCGGC
TGGTACAACG CGCTCCTCGG CGATTACGAC GCGGCTCGAG TCCACTGTGA AGAGGCGTTG
CGAATACTTC GGGACGTCGA CGCCGAAGCC CCCACCATAT GCGATGTCCT CGACAGCCTC
GGCTACATCG CCCAGCATGT CGGCCGATAC ACCGAAGCGG TGGACTACCA GAACAAGGCG
TTGGCGGCGC TCAAAGAAGG ATGGGGCGAG GGCTCTCGTC CGAAGATGTA CGAACGCCTC
GGCGACATCC ATCGCGCTGG TGGCAGCGGT CATGAGGCCC GCGACGCGTG GCGTCGGGCC
CTCGACCTCT ACACCTCGCA GCACCGGGGC GAAGCAGCCG ACGCCGTCGC CGCCAAACTG
GCCGACCTGT CCACCGACGC GGAAGGGCGG TGA
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| Protein sequence | MDRGRRLPTV DIRLLDGVEM LRDGVSVAAG YPRQRMVLAA LAVEVGRVVR PETLMARIWD
GPVPESAVNS VQSYISRLRK LFEGVEGTNI ERRFGGYVLA TEPETVDLHR SRNLIAKARA
TVDDDVADRL YGEALGLWRG EAFAGCGTAW FDGVRASLAA EFHRAGLDHN DVLLRLGRHD
ELVTVLPDSV RGHPFDERLT GQLMLALFQA GRQTEALEHY ARLRDRLVEQ LGNDPGPELR
EVHRRILVGD ASTPKPMTVT GPVPRQLPGA PRLFTGRDKE IGRLDDGHDA DAAPVWVISG
PGGIGKTWLA LHWANQRLDH FPDGQLYVNL HGFHPTEEPV PAAAALNQAL EALGVPATAI
PADTEARAGK YRSLVAGKRM LVLLDNARDG EQVLPLLPGG GCCTTLITSR RDLPGLGAAH
GARSLRLGTL DDGQSWQALA RHLGEQRLAE QPAAVTELIE RCEGLPLALG IIGARAAAHD
DFPLTALAEE LRERADRLDM MDSGELVVGL RAVFDGSYRT LASDEAQLFA WLGSVDGRDI
GLHAAASLAG LPIGRTRMLL RGLETANLIE QHTPGRYRMH DLTRLYAAER SNADPAALRR
LVVHYLHTAT RMDELCLPDR YRDDHDPGEL VEGCLPAPLD DPQRARRWLS LERANILSVQ
GIALEQGWYD KVWRLAWCST MVLWNLNYAD DALLVWQNAT AAAERLGEPR VDAIVAAFLG
RAFNRVGRVK DGIRHMSVAL RGFETIGDRP HQCIIRIHIA RCHTRLGNVR QALSVVQRAA
RLPKDEVPPI EFASALNAVG WYNALLGDYD AARVHCEEAL RILRDVDAEA PTICDVLDSL
GYIAQHVGRY TEAVDYQNKA LAALKEGWGE GSRPKMYERL GDIHRAGGSG HEARDAWRRA
LDLYTSQHRG EAADAVAAKL ADLSTDAEGR
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