Gene Snas_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3609 
Symbol 
ID8884808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3839105 
End bp3840292 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID 
Productphage/plasmid-related protein TIGR03299 
Protein accessionYP_003512362 
Protein GI291301084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00236551 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCGG CCTTCGACGT CAACGACGCG TTCGCCCAGG CCAAGCTCGA CCAGATCCGC 
GCCGCCGATA ACCAACAAGC CGCCATCGCC GCGCAAGTCG CCCGCGGCGA CCTCCAGCCC
CTGGGAGGCG ACACCTACCG CGTCATGACC GGGTGGGATC GCGGCGAGAT CATCGCCTAC
GACACCGTCC AGGGCATCAT CGCCCACCAT GGACTGGACA CCACCACCGG ACAAGCCGCC
CTGTACAGCG CCGCACCGCC CTGGCACGGG CTGGGCTGCT ACATCCCCGG CGGCACCCGC
GACATCGACG AAGTCTTGAA ACTGTCGCGA CTGGACTTCA CCGTGCACAC CACCCCCGCC
TTGTACCAAT GGGACGATCA GCTGCACACC CACCCGGACA AGTTCCACAC CCTACGCTCC
GACACGGCCG CGCCGTTGGG TGTCGTGGGA TCCAAGTACC ACACGGTGCA AAACCGCGAA
TGCTTCGAGT TCTTGCGGAA CCTCGTCGAG TCCTACGACG TGGTGTGGGA GTCGGCCGGT
GCGGTGCGCG GCGGGCGCCG CACCTTCGTG TCCATGCGGC TGCCCGACAC CGTCACCGTC
GACGCCGCCG GCATCAACGA CACCATTACC CCGTTTGTGG TGGTGTTCAA CTCCCACGAC
GGATCCTCAT CGATCACCGC CGTGGTCACC CCGTATCGGC CGGTGTGCGC CAACACCGAA
CGCCTGGCGC TGGACAACGC CTACACCTCG TGGAGCATTC GCCACACCGA ATCGGCCATG
CATCAAATGC GCCAAGCACG CCGCACCCTG AAAATGTCGG TGAAGTACTA CGACGAGTTC
GCCGCCCAGC AAACCACGCT GGCACACCAT GACATGGTCA TCGACGAGTT TCGCGCGCTC
ATCGACGAGT TGTGGCCGCT TGAACCCAAC GCCACCAAAC GCGGCAAGAC CAACGCCAAG
AATCGGCGCG AGGCCTTGAT GGCCCAATGG GACACCGAAT CGCGCCGCTG CGGGTCCACC
TTGTACGCCG CCGAGCGCGC CATCACCGGC TACATCGACC ACGACAAGCC CCGCATGCTC
GGCAAGTTCT CCACCCTAAA CGCCGCTAGG GCCACCGCGA TTGTCGAAGG CCGCGACGAC
GGCCTCAAGA CCAAAGCCCA CAAAAAACTC ATGCTGCGCG TTCGCTGA
 
Protein sequence
MDAAFDVNDA FAQAKLDQIR AADNQQAAIA AQVARGDLQP LGGDTYRVMT GWDRGEIIAY 
DTVQGIIAHH GLDTTTGQAA LYSAAPPWHG LGCYIPGGTR DIDEVLKLSR LDFTVHTTPA
LYQWDDQLHT HPDKFHTLRS DTAAPLGVVG SKYHTVQNRE CFEFLRNLVE SYDVVWESAG
AVRGGRRTFV SMRLPDTVTV DAAGINDTIT PFVVVFNSHD GSSSITAVVT PYRPVCANTE
RLALDNAYTS WSIRHTESAM HQMRQARRTL KMSVKYYDEF AAQQTTLAHH DMVIDEFRAL
IDELWPLEPN ATKRGKTNAK NRREALMAQW DTESRRCGST LYAAERAITG YIDHDKPRML
GKFSTLNAAR ATAIVEGRDD GLKTKAHKKL MLRVR