Gene Snas_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3597 
Symbol 
ID8884796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3820911 
End bp3821732 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512350 
Protein GI291301072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.713823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG TCGGAATACA CGGAATCCGG TGCTATCGAC CTGATCCTCC ACTTGAAGCC 
GCACGTTATT TGGAGACCAA ATGGCGCCAG GCGCTGGAAG ACAATCCAGT ACTGAAATGG
CCAGTAAGGT CGATCGATTT CTCTATTAGT TATTATGCAC ATCTGCTGGT CCAACAAGGA
CGACAATCCG ACACAGACCT AGATGATGCC GCATTGCAAT TGCTGACCGA GCTCTTGGCA
CCCTGGACAC CTGATGCCGC CGGTATCCAA GGTCGGGCCA TGGTACTGCT CCGACTTGCC
GCAGCGCGTC TAGCCGGGAA GCACGGCCTG GAGGAACGCA CAGTGTGGCG TTTCATTCGA
CAGTTCGCGG CTGAAGTTTC CTACTACCTG GAAGGGCGTG AAGGTTTTAC TCCGCGTGAC
ACAATCATTG ACGCAACTGC GAAAGCAATC GACAAGGCTG ACATCGTCAT CGCCCACTCA
CTAGGCACTG TGATCGCCTA CGAAGCCCTT CACCGGCACC GCGTGGCTGT GCCGCTGTTG
ATCACGCTTG GATCGCCGTT GGCGATACCC GCCATCGTCT CCCGTCTAAA ACCTCCTGTC
ATTAATGGTC GGGGTCGCAA GCCGCCCAGC GTAAAGCGTT GGATCAATCT TGCCGACTGC
GGCGACTACA TTGCCATTCC TATCAATGAA ACCGATAGCA TCAACGCAGT TTTCGATGGG
ATCGACGAGC ACAATGATTC CATTCGCATT GGCATTTTCA GATCTCATGG TATTGAAGGC
TACCTTCGAC ACCCAGTTCT CGGACGCGCT GTTGCAACTT AA
 
Protein sequence
MKIVGIHGIR CYRPDPPLEA ARYLETKWRQ ALEDNPVLKW PVRSIDFSIS YYAHLLVQQG 
RQSDTDLDDA ALQLLTELLA PWTPDAAGIQ GRAMVLLRLA AARLAGKHGL EERTVWRFIR
QFAAEVSYYL EGREGFTPRD TIIDATAKAI DKADIVIAHS LGTVIAYEAL HRHRVAVPLL
ITLGSPLAIP AIVSRLKPPV INGRGRKPPS VKRWINLADC GDYIAIPINE TDSINAVFDG
IDEHNDSIRI GIFRSHGIEG YLRHPVLGRA VAT