| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3500 |
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| Symbol | |
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| ID | 8884699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3707539 |
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| End bp | 3708168 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003512256 |
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| Protein GI | 291300978 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00016281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGTGGGCT ATGTGAAGGG CCGGATCCGG CGCGAGGACA TCCTCTCCGC CGCCGTGGCC
GTGTACGGCG AGGTGGGATA CCACGGCGCA TCGCTGCGGG AGATCGCCAA ACGGGTGGGG
ATCACCCACG CGGGACTGCT GTACTACTTC CCGTCCAAGG AGGCCCTGCT GGCCGCGGTG
CTGGAACGCC GCGACGCCGC CGACGCCGAA CGGGAACGGC TGCTGGGCAA TCCGGGCCTG
GAAGTGCTGC GCTCCTTCGT GGCACTGACC GCCCACAACG CACAAGATCG CGGCATCGTC
GACATCTACA GCCGCCTCGC CGCCGAGGCG GTCTCGCCCG GCCACCCGGC CCACGACTAC
TTCAAACGCC ACTACCGTGA CGCGCGCGCC TGCCTCGTCG AGTCGTTCCA GGTGCTGGCG
CGCTGCGGCC AGCTGCGCGA CGGTGTCGAC GCCGGGCAGG CGGCGGTCAT GTTCATCGCG
CTCATGGACG GACTCCAGGT CCAGTGGCTG ACCAACCCGG CCGAAGTGGA CATGGTCGCC
TCGGTGCGCG GCTTCCTGGA GTACGTGCTG GCCGTGCCAC TGGACGCGGA GCCGGTCACC
GGCCCGGCTC AGTCCACAGT GCGTTCGTAG
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| Protein sequence | MVGYVKGRIR REDILSAAVA VYGEVGYHGA SLREIAKRVG ITHAGLLYYF PSKEALLAAV
LERRDAADAE RERLLGNPGL EVLRSFVALT AHNAQDRGIV DIYSRLAAEA VSPGHPAHDY
FKRHYRDARA CLVESFQVLA RCGQLRDGVD AGQAAVMFIA LMDGLQVQWL TNPAEVDMVA
SVRGFLEYVL AVPLDAEPVT GPAQSTVRS
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