Gene Snas_3437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3437 
Symbol 
ID8884636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3636089 
End bp3637111 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content69% 
IMG OID 
Productglycosidase PH1107-related protein 
Protein accessionYP_003512194 
Protein GI291300916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.874015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA CACCGCCCGA CGCGATCTTC GGCGACCGTG AGGGTTGCCA ACTCCGCGAA 
CCCTTCGACA AACCATGGGG GGCCACGGCT CTGCCGTCGT TCACCCGGCA TCCCGGCAAT
CCCGTGCTGA CGGCGGCCGA CTGGCCGACT CCGGTGGCCA CGATCGGCAA CCCCGGTGCC
GCCCATGACG GCCACGGCAT CGTGTTGCTG TGCGGGGTCG AGGATCGACG AGGTATGACG
ACGCTGAACA TCGCGCGCAG CCGTGACGGA GTCGGTGACT GGAGCATCGA GTCCCAGCCG
TTGATCGAGC CCCGCAGCTG CGGCTCCCGG CACTGGTCGG GGGTCCGGGA CGGACGACTG
ACCTGGGTGC CCGAACTGAA CGGCTGGGTC ATCGCGTTCA CCGCCTTCGG ACACAGCGGG
ACCGGTGTCG CCCTGGCGTT TACCTCGGAT TTCAAGGACG TGGTGCCGCT CGGTGTCGCC
GCGCCCCCCG ACGACCAGAG CGGTGTGCTG CTGCCGCGCC GCGCCGACGG TGAATTCGTT
CTCCTGCACC GGCCGATGTC GCCAATGTCG CTGCGTGCCG ACGTGTGGTC GTCACGGTCA
CCGGACCTGT TGCGGTGGCA CGGCTCCAGG CCGGTTTTGC CCGCGAGGCC GACCCCGTGG
TGGGACTCGG CCGGTGTCGG TGTGGGGCCG CCGCCCATCG AGACCGACCA TGGCTGGCTG
ACCGTCTACT CCGGCGACAA ACGCGTCGAC GATCGCACCG TGCGCCGCGT CGGTATGGCG
CTGCTGGACC GCGATGACCC GACGCGGGTG ACGCATCGCG GCGACGAATG GGTCCTCGAG
GCGTCCGAAC CCTATGAGAC GGGCAGGTCG CCAACCCGTT CGGTGACGCC CAGCGGGGCC
GTGATCGATG TCGAGTCCAG GGCGCTGCGG CTGTACTACG GTGTCGCGGA TTCGGGTGTC
TGTCTGGCCA CAGCGGACCT GGACGAGGTT CTCACCTACC TGCTCAACCA ACCAGTCGGC
TGA
 
Protein sequence
MSRTPPDAIF GDREGCQLRE PFDKPWGATA LPSFTRHPGN PVLTAADWPT PVATIGNPGA 
AHDGHGIVLL CGVEDRRGMT TLNIARSRDG VGDWSIESQP LIEPRSCGSR HWSGVRDGRL
TWVPELNGWV IAFTAFGHSG TGVALAFTSD FKDVVPLGVA APPDDQSGVL LPRRADGEFV
LLHRPMSPMS LRADVWSSRS PDLLRWHGSR PVLPARPTPW WDSAGVGVGP PPIETDHGWL
TVYSGDKRVD DRTVRRVGMA LLDRDDPTRV THRGDEWVLE ASEPYETGRS PTRSVTPSGA
VIDVESRALR LYYGVADSGV CLATADLDEV LTYLLNQPVG