Gene Snas_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3428 
Symbol 
ID8884627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3629921 
End bp3630607 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003512185 
Protein GI291300907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.69738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTG AGTCAGATTC CGTCGAGCGT CGGGCGCGTG TGCACGCGGC GTTGGGTGAG 
CCTGTGCGGT TGCGCATCGT GGACGCCTTG ACGTTGGGAG ACGTTTCTCC GCAGGAGCTT
GAGCGCCTGG TGGGGATGCC GTCGAACCTG CTGGCGCATC ATCTGAAGAC GCTCGTCGAC
GCCGGGGTGG TCACGCGTTC GCGGTCCGAG GCCGATCGGC GTCGGACCTA CCTGCGGCTG
GTTCCTGAAG CAGTGGCAGG GCTCCAGGTA TCACCGCGCG TTGTGGCTTC GCGGGTGGTG
TTCGTGTGCA CCCGCAACAC CGCGCGGTCC CAGCTGGCGG AGGCGCTGTG GCGACAGCAC
AGTCAGGTTC CGGCCGCCAG TGCCGGGACC GATCCGGCCG CACGAGTGCA TCCGAAGGCG
GTAGCCGTGG CGCGGCGGCA CGGGCTGCGG CTACCGCCCA GCGGGACAGC TCACGTATCC
GATGTGGTGG TTGAGGGCGA TCTGGTGATC GCCGTGTGCG ACAACGCTCA CGAATCAATG
GCCGTTGAGG CTGCACGGTG GCATTGGTCA GTGCCCGATC CGGTGCCGGT GGGTACCGAT
GAGGCTTTCG AATCGGCCTT CGCCGACATC GACCGGCGCA TCGACCGCTT GGCGCCGATG
CTGACTGTCG CAACGGGGAT GTCGTGA
 
Protein sequence
MLIESDSVER RARVHAALGE PVRLRIVDAL TLGDVSPQEL ERLVGMPSNL LAHHLKTLVD 
AGVVTRSRSE ADRRRTYLRL VPEAVAGLQV SPRVVASRVV FVCTRNTARS QLAEALWRQH
SQVPAASAGT DPAARVHPKA VAVARRHGLR LPPSGTAHVS DVVVEGDLVI AVCDNAHESM
AVEAARWHWS VPDPVPVGTD EAFESAFADI DRRIDRLAPM LTVATGMS