Gene Snas_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3382 
Symbol 
ID8884581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3580261 
End bp3581373 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512139 
Protein GI291300861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.394336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAA CACCACCGGA AAAGAAGCGT CTCCTGGCGA GACTCCAGTC GCCGCCCCAT 
TGGACCGACA CTCGTAAGCG GCTCACGGTC ATCGGCGGAG TCGTCGCCGG GGTCACCGTC
ATCGCCGCGA GCGTGATCGT CTACTCGGCG ATGGGATCGG GTCCGGAAGG TGTCGTCGAC
GACTACCTTT CCGAGCTGCG ATCCGGAGAC GCCGAGGCCG CGTTGGAGTA CGCGTCGTCG
GTGGACGAAC TCACCAAGGC GTCGAGCGAA CTGCTCGTCG ACAAGGCCAT GGCCACCGAC
TGGGAGGTCA CCCAACTGGT GCGCCGCCAC GAGGAGCAAG ACGAGACCGC GACCGTCGAC
GTGACGATCA CCGCGGCCGA CAAGACATCC CGGCAGGGTC GGTTCCATCT GGACGAGAAG
GGGCCGGACG GCTGGCGCAT CCTCAATCCA CTCATCAAAG TAGACATGAG TGAGCTCCCG
ATGGAGTTCG TCGAGTTCAA CGGCACCATC GTCGAGGATT CCGGGTTGAT GTGGATGTTC
CCCGGTGCGT ACCGAGCCTT CCGCGACAGT GCGAGCCTGT TCGAGCTCTC CGAGCCGACC
TATGTGGCCG TTCCGTCCGC CGATGTGCCC GAGGAAGGGG ACCTACTGCC GCCCGAGACA
TACCTACCCG TCCTCAAGTC CGGCAAGGAC CTGGACACCG AAGTGAATCG GCAACTGGCC
GACTGGATCG ATGAATGCGT GAAGTCCAAA CACATCGATC CGGAAGGGTG TCCGTTCTCG
GGTGCCATGT ACACGGACAG GGGCATCGTA TCGATCGACG ACGACCTTTA TCAGACCGAA
GAGGTCACAT GGAAGGTCAA GGATCATCCC ACGGTTCGAC TGATACTGAA GTCAGAGGGT
TTCGGCATCC GGACTGTCGA ACCGGGAAAA CTGACGATCA GTGGCACAGG CACCGACATA
TCCAGTTCCG GTGAACCGGT CGGGAAGTTC AAGGGCGACT GCGGCGTCAA CCTGGATATG
ACGACCGTCA CGCTCGCCGA GCCCATGGAG TTCGAATTCG TCTCCGAGTC AGAGGGCGCG
CTGTCCTACA CCTGCGGTGA GCTACTCGAA TAG
 
Protein sequence
MTETPPEKKR LLARLQSPPH WTDTRKRLTV IGGVVAGVTV IAASVIVYSA MGSGPEGVVD 
DYLSELRSGD AEAALEYASS VDELTKASSE LLVDKAMATD WEVTQLVRRH EEQDETATVD
VTITAADKTS RQGRFHLDEK GPDGWRILNP LIKVDMSELP MEFVEFNGTI VEDSGLMWMF
PGAYRAFRDS ASLFELSEPT YVAVPSADVP EEGDLLPPET YLPVLKSGKD LDTEVNRQLA
DWIDECVKSK HIDPEGCPFS GAMYTDRGIV SIDDDLYQTE EVTWKVKDHP TVRLILKSEG
FGIRTVEPGK LTISGTGTDI SSSGEPVGKF KGDCGVNLDM TTVTLAEPME FEFVSESEGA
LSYTCGELLE