Gene Snas_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3340 
Symbol 
ID8884539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3540594 
End bp3541151 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content66% 
IMG OID 
Productbifunctional deaminase-reductase domain-containing protein 
Protein accessionYP_003512099 
Protein GI291300821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.1725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACA CGACACCACA AACCGCTGAT GGCAAAGTGC TGTGGCACTT CTCGATGTCG 
CTCGACGGCT TCGTGGCGGG CCCGAACCAC TCGATGAGCT GGTTGAGCCG CACCACGTCC
TCGCGTCCCG GTCTGGTCGA GGAGTACATG TCGACCACCG GGGCCGTCCT GGGCGGCCGG
TCCGGCTGGG ACGCGACCCC CGAGGGCGTA CGACCGTACA ACGACTGGCA GGGACCGATC
TTCATCCTCA CCCACCATCC CGAGGACGCC CGCAAGGAAG AGGGCGTCAC GCTCCTCAAC
TGCGATGTCG CCGAGGCGGT CCGCATCGGA CTGGAAGCCG CCGGAGGCAA GAACCTCGAA
GTGTTCTCAC CGACGATCGG CGCCCAGCTG CTGGAGCGCG GCCTGATCGA CGAGATCGAC
CTCCACATAT CACCGGTGCT GCTCGGCGAC GGCGTCCGGC TGTTCCACAA TCCCGGCGGG
CAGCCGGTCC ATCTGAATCT GGTCGGCGCC GACGAACCCA CCGTGGAGAT CAACGTCCGC
TACCGCCCAC TCTCCTAG
 
Protein sequence
MIDTTPQTAD GKVLWHFSMS LDGFVAGPNH SMSWLSRTTS SRPGLVEEYM STTGAVLGGR 
SGWDATPEGV RPYNDWQGPI FILTHHPEDA RKEEGVTLLN CDVAEAVRIG LEAAGGKNLE
VFSPTIGAQL LERGLIDEID LHISPVLLGD GVRLFHNPGG QPVHLNLVGA DEPTVEINVR
YRPLS