Gene Snas_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3310 
Symbol 
ID8884509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3498538 
End bp3499686 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content70% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003512069 
Protein GI291300791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.146111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.517695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG TACACGGAAC CGTGGCCGAG GGCTTTGAGG CGGTGCGCGA GGAGTTCGCC 
GCCGTGGCCG AGGAAGCGGG GACGCAACTG GCGGCGTATG TCCATGATCG ACGCGTCGTG
GACCTGTGGA CCGGCGAGGA CGTCACCGGC GACACCCTCA CCGGGATCTA CTCGTCCACG
AAGGGCGCGG CGAGCCTGGT GGCCGCGCTG TTGACACAGG ACGGCGTGCT GGACCTCGAC
CGGCCGATCG TCGACTGCTG GCCGGAGTTC GGCGCGGCCG GGAAGGACCG CATCACCCTG
CGCGACGTGC TGTCGCACCG CTCGGGAATC ATCGGCGTCG ATGATGGACT GTCGGCGGAC
GAGCTGGCCG ACGACGCGGT GATCGCTCAG CGGCTGGCGG CCCAGGCCCC GCACTGGCGG
CCGGGCATGG CATACGGATA CGGCGGCTTC GTGACCTTCG CGGTCGTCGG CGAGGTCATC
CGTCGGATCA CCGGACGCAC CCTCCAGGCG CACTTCACCG AACGGGTCCG TGAGCCCTTC
GACCTGGACG TCTACCTTGG ACTGCCCGAG GATCGCGAGG ACCGGTACCG CACGATCCTG
GCCAGCCTGG CCACACCGGA GGAACAGGCA GCGTTCTGGG CGAACGTTCC CGGGCCCAAC
AGCCTGCTGG GCGTCGCCTA CGGCCTCAAC ACCGATCCGC CTCTGGACCA GGTGGCCTTC
GCCAACACCC GCCGGGTCCG GGAACGGGGT CAGGCTTCCG GCGGCGGGGT CGGCAGTGCG
CGCGGCCTGG CGGGAATGTA CGCGGCGGCG GCTTTCGGCC TCCATGGCCG GGACCCGTTG
CTGACGGCCG CGACCGCCAC CGAGTTCGCG ACGATCCACA CGATCGGCGG TGACCTCGTC
CGGGGTGCGT CATCGGCCTT CGGTCTCGGG TTCGAGGCCA AGGGGCAGCA GTACCCGTTC
CTCAGCGCTC GCGCGTTCGG CCACGCCGGG TCGGCGGGTT CGGAGGCGTT CGCGGACCCG
ATCACGGGTA TCGCCTTCGG TTACACGCGG CGCCGGTTCT CGTTCAACTG GAGCTATCCG
GAACACGACC GGCTGGTCGC CGCCGTGCAT CGCGCCGCTG TCAGTCGCCG AACGGGTAAG
GCTGCCTGA
 
Protein sequence
MTEVHGTVAE GFEAVREEFA AVAEEAGTQL AAYVHDRRVV DLWTGEDVTG DTLTGIYSST 
KGAASLVAAL LTQDGVLDLD RPIVDCWPEF GAAGKDRITL RDVLSHRSGI IGVDDGLSAD
ELADDAVIAQ RLAAQAPHWR PGMAYGYGGF VTFAVVGEVI RRITGRTLQA HFTERVREPF
DLDVYLGLPE DREDRYRTIL ASLATPEEQA AFWANVPGPN SLLGVAYGLN TDPPLDQVAF
ANTRRVRERG QASGGGVGSA RGLAGMYAAA AFGLHGRDPL LTAATATEFA TIHTIGGDLV
RGASSAFGLG FEAKGQQYPF LSARAFGHAG SAGSEAFADP ITGIAFGYTR RRFSFNWSYP
EHDRLVAAVH RAAVSRRTGK AA