| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3281 |
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| Symbol | |
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| ID | 8884480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3468235 |
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| End bp | 3471726 |
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| Gene Length | 3492 bp |
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| Protein Length | 1163 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | glycoside hydrolase family 2 sugar binding protein |
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| Protein accession | YP_003512043 |
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| Protein GI | 291300765 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.667094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACT ATTACGGGCC GGTCCCGTTG TGGTGGTGGA GCGGTGCGCC GCTCCACACC
GAACGGTTGA ACTGGCAGCT GGACCGCCTC ATGGACGGCG GGATACGGCA GGCCGTCGTC
ATCTCACTGG CCCCCACCGG TCCACTGTGG GGCTGTCCGG GTGACGAACC GGAGTTCATG
TCGGACGAGT GGTGGGAGAT CTTCACCGCG GTCTGCGCCC ACGCCGAACG GCGCGGGTTC
GGACTGTGGT TCTACGACCA GCTCGGCTTC TCCGGCGCCA ACATCCAGGG ACGCGTCGTG
GCCGCCCACC CGTCGGCCCG AGGACAGCGC CTGACCCGCG AGGGGCCGGT CGCGTCGGGT
TTCGACTACC TGAATCCGGA CGCGTGCGCG CTGCTGTTCG ACGCCGTGCA CGGCGAGCTG
GAACGACGCG TGGGCCACTA CTTCGGGACC GTCCTCAAGG GCACGTTCCA GGACGAACTG
CCGTCCATAC CGAGCTGGAC GGCGGGCTTC TCCGACGCGT TCGCGTCCCG GCGCGGCTAC
CGGCTCGAAC CGCACATTGA GGCACTGTGG AGCGACATTG GAGCGGACAC CGGTCCGGTG
CGCCGTGACT ACCAGCTCAC CCGGGCCGAG CTCGCCGAGG AGGCGTTCTT CAAACCCCTG
CACGACTGGC ACGCCGAACG CGGGCTGCTG GTCGGTTGCG ACCAGCAGGA ACCGGCCCGG
GGCGGGCACA CCGCCGCCGG GGTCCGCTAC TACGCCGACT ACGCCCGCAC CCACCGCTGG
TTCTCCGCCC CCGGCAGTGA CCACTGGGGA GACGGCAAAC GGCACAGCTC GCTGGCCCAC
GCGCACGGGC ATTCGCGGAC CTGGATCGAG GCGTTCCACT CCACCGGCTG GGGCGGCACG
CTCGAGGAGA CCCTGGACTG GCTGATCCCG TGGCTGCGCG CCGGTGCCAA CCTGTACAAC
CCGCACGCCG TGTACTACTC GACCGAACAG GGCCGCTTCG ACTGGGCGCC GCCGTCGACG
TGTTGGCGGC AACCGTACTG GCGGCACTAT CCGGTGTTCG CCGAGACGGT GGCGACACTG
TGCGAGGCGG TCGCCGAGGG CACCCACGTG TGCGACGTCG CGCTGCTCGA CCCGGTCGCC
ACCGTCCAGC ACGACCTGCC GCCGTTCGCC GACGAGGAAC CGTTCTTCAA CGACTCCGGC
GACTGGCCCA CGGCACATCG CACCTATCAG GACCTCGCCG GATGGATGAC CTGGCACGAC
TTCCGTACCG GGCTGCTGGA TCGCCTGGGC ATCGACTTCG ACGTCCTGGA CGAGCCCTCC
ATTCAGAAGG CGGGCGCCGC GATGACGCTG GCGGGCGAAC GCTACCGGGT CGTCGTCCTG
CCCGCCGCCC GCGTCCTGGA ACCGGCCACG GCGCGAGTGC TGGTGGAGTT CGCGCAGGCG
GGCGGCACGC TGATCGCGGT CGGAGAACTA CCGCAGCGGG CCGCTGGCCG CGGCGACGAC
GACACCGAAG TGGAGCGACT GCGGCGGCTG TTCACCGACG GCGCGGCCAT CGCCTGCGCT
GACCTCGACG AGGCCGCGAC CGCCCTGTCG GGTCTGCCCC GACGGGTGGA CGCCGACGTG
CCGACACTGC TGCGCGAGGC ACCCGACGGC AGCCACCTGC TGCTCGTCCC GGCGGTCTAT
CCCATGGCGA CCAAGGCATC CCTGGCCGGC GACACCTTCC TCAGTGGCGT CTACACCTTC
GAACCGCCCG CGATCCGGGA CAAGACCGTC ACCATCACCG GCGACTTCAC CTCGGCCGAG
GCCGTCGCCC TCACCGGCGG TGCGGCCCGG CCGCTGCCGG TGGAACGGGA CGGGGATCGG
TTGCGTGTCA CCGTATCCTT CGACGAGGCA CCCGTCGCAC TGATCAGACT GACCACCGAG
GTACCGACGG AACCGGCGCC CGCGCCCACC CCGTCGCGTC GGCTCGCGCT CGACGGGGAC
TGGACGGGGC GCCCGGAATC CACCCTGGAC TATCGGCACG GCGACTTCCC CGGACCGGAC
GCGATACAGA TCTGGCGGAT GGACGGCCAG CGCGCCACAT TCGGCGAATG GGCGACGCTG
CGCCGCCCCG GCGGCGACTG GGAACCGGTC ACCTTCTCCC AGACCTGGGG CCCCGGCGAC
AAACCGGACG GCTTCCCCCG CGTCCACGAC AACCGGGGCT ACGTGCCCGA GGAGTTCATC
ACGATCGGCA CGATGCGCAC CGGTGACACC GCCGAACTGC GCGCCGAACT CGCCGTCGAC
GCGGCGGGCG AGTACGTGCT CGTCGTCGGC GCCCCCACCG CCAAGACGAT CACAGTGGAT
GGTGAGGAGC TGCCCGCTGG CAACGGCTAC CACGCCGAAT GTCCGGTGAC GCTTTCGGCT
GGGCGCCACC GCATCGAGGT CACCTTCACC GCGCTCACCG ACGAGGTCGC CAGCGCCTCA
TACGTTCTTA TGTCACGGGC TGACTGGCGC CCCCGGCCGC AATGGCTGCG CCCCGCGACC
GAGGCCCCGG TCGGCACCAC CTTCCACAGT GACATCTCCG GAACCGTTCG GGTGCTGCTG
GCCACGGTCG GCGACGTCGT ACTGCGATTG AACGGGAAAG AGCTGGCACG GCACGGCGAG
TTCGACAACT ACACCTGGCG GCGCATGCCC CGCATGGCCA TCTACGACAG CACCGTCGCG
GCGGGCGACA ACCACCTGAG TCTGGAGTTC GGCGACACCG AAGCACAGGC CCTGGTCGAG
GTCAGTCTGC CGGGGGACAA GTGGGTGGTC AGCGGATCGT CCGGATGGGA CGCGTCCGTA
GTGGACCACC GCATGCACTT CGACCCGCAG GTACTCACCG CGCGGCCCCG CCCGCGACCC
GACACCGCAC CGCTGACATC CGGCGACACT GGACAGCGAC GACTGCGACT ACGGCTGCCA
CCCGGCACGG TCGAACTGAC CGTGCCCGCC CGCGCCGAGT TCACCGCGTC GTTCCGCGGC
GCCCCACTGC CGGTCGCCGA ACCGATCCGG CTACCGCAAC CCGCCAGTGG CGGCGAAGTC
GTGGAACTGT CGTTCCCCCA CGACGACCGG TGGCCGGGCG GCGCGCAACT GACCGGCCCC
GTCACCGTCC ACACCCAGAC CGGCCCGGTC ACCTTGGGAG ACTGGGCCGA GATCGGACTG
GGCGACTTCT CCGGTGCGCT CGTCTACGAA ACCGAGGTCT CACGTCCCGC CCCGGTCACC
GCCCGCCTGC ACCTGGGCGA GGTGCGCGGA ACCGCCGAGG TGCACGTCAA CGGCGAACCA
GCCGGAGTGC GGCCGTGGAG CCCCTATACC TTCGAGGTAC GGCTCGCCGC CGGGACCAAC
CGGCTCGCGG TCACCGTCCA CAACACACTC GCGCCCTATC TGGCCGCGGT CAACCCGCTC
GCCGGGACGC TGCCCGGCCA GGAACGCTCC GGCCTGTTCG GCCCCGTATC CCTGGAGGTC
TTCGATGACT GA
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| Protein sequence | MSDYYGPVPL WWWSGAPLHT ERLNWQLDRL MDGGIRQAVV ISLAPTGPLW GCPGDEPEFM
SDEWWEIFTA VCAHAERRGF GLWFYDQLGF SGANIQGRVV AAHPSARGQR LTREGPVASG
FDYLNPDACA LLFDAVHGEL ERRVGHYFGT VLKGTFQDEL PSIPSWTAGF SDAFASRRGY
RLEPHIEALW SDIGADTGPV RRDYQLTRAE LAEEAFFKPL HDWHAERGLL VGCDQQEPAR
GGHTAAGVRY YADYARTHRW FSAPGSDHWG DGKRHSSLAH AHGHSRTWIE AFHSTGWGGT
LEETLDWLIP WLRAGANLYN PHAVYYSTEQ GRFDWAPPST CWRQPYWRHY PVFAETVATL
CEAVAEGTHV CDVALLDPVA TVQHDLPPFA DEEPFFNDSG DWPTAHRTYQ DLAGWMTWHD
FRTGLLDRLG IDFDVLDEPS IQKAGAAMTL AGERYRVVVL PAARVLEPAT ARVLVEFAQA
GGTLIAVGEL PQRAAGRGDD DTEVERLRRL FTDGAAIACA DLDEAATALS GLPRRVDADV
PTLLREAPDG SHLLLVPAVY PMATKASLAG DTFLSGVYTF EPPAIRDKTV TITGDFTSAE
AVALTGGAAR PLPVERDGDR LRVTVSFDEA PVALIRLTTE VPTEPAPAPT PSRRLALDGD
WTGRPESTLD YRHGDFPGPD AIQIWRMDGQ RATFGEWATL RRPGGDWEPV TFSQTWGPGD
KPDGFPRVHD NRGYVPEEFI TIGTMRTGDT AELRAELAVD AAGEYVLVVG APTAKTITVD
GEELPAGNGY HAECPVTLSA GRHRIEVTFT ALTDEVASAS YVLMSRADWR PRPQWLRPAT
EAPVGTTFHS DISGTVRVLL ATVGDVVLRL NGKELARHGE FDNYTWRRMP RMAIYDSTVA
AGDNHLSLEF GDTEAQALVE VSLPGDKWVV SGSSGWDASV VDHRMHFDPQ VLTARPRPRP
DTAPLTSGDT GQRRLRLRLP PGTVELTVPA RAEFTASFRG APLPVAEPIR LPQPASGGEV
VELSFPHDDR WPGGAQLTGP VTVHTQTGPV TLGDWAEIGL GDFSGALVYE TEVSRPAPVT
ARLHLGEVRG TAEVHVNGEP AGVRPWSPYT FEVRLAAGTN RLAVTVHNTL APYLAAVNPL
AGTLPGQERS GLFGPVSLEV FDD
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