Gene Snas_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3234 
Symbol 
ID8884433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3412454 
End bp3412918 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003511997 
Protein GI291300719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.255403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00212329 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGATT CCGTGGACAC CGGCATCCTC GACCGGCTGC TGCACATCGC CGTGGTGATC 
CAGCAGGACA TGGCCGCCAC CTTCTCGGGC ACCGGACTCA ATCCGGCGCG CGTGCACTTG
CTGTGGGTGC TGCGGGAGCG CCAGCCCCAA ACGCAGCAGG CTTTGGCGGC GGCGCTCAAT
GTCACCCCGG CCAACGTGAC GGGTCTGGTC GACGCTTTGG AGAAGCATGG TTTCGTCGAG
CGGCGCCGTC ACCCCGAGGA CCGGCGCGCG ATCTTGGTGG CGTTGACCGA GCGCGGCGCT
GACACGATGC GGGCCATGGC TCGTGATCGG GAGCTGTTCG CGACCGCGCT TGTGGAGGAT
CTCGACGGGG ATGAGCGTCG CCGTCTTCAT GACGCGTTGG GTCAGGTGGC CGAGCGCATG
GAGGACCTCA CTCGTCCGAT GCGCGAGTCG AAGGGGGAGG CATGA
 
Protein sequence
MNDSVDTGIL DRLLHIAVVI QQDMAATFSG TGLNPARVHL LWVLRERQPQ TQQALAAALN 
VTPANVTGLV DALEKHGFVE RRRHPEDRRA ILVALTERGA DTMRAMARDR ELFATALVED
LDGDERRRLH DALGQVAERM EDLTRPMRES KGEA