Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3230 |
Symbol | |
ID | 8884429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3410008 |
End bp | 3410583 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003511993 |
Protein GI | 291300715 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0704446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000846551 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGACCG TCACCCCACC CCGCCTGACC CCCGCCGCCC GCCGCGTCCT CGACGTGGCC AGCACCCTGT TCTACGAACG CGGCATCAAC ACCGTCGGCA TGGACCTCAT CGCCGCCACC GCCAAGGTCA CCAAGAAAAC CATCTACGAC CGCTTCGGCT CCAAAGAAGC CCTGGTCACC GCGTACCTGT CCGAACGCGA CCACACCTGG CGCCGCCACC TCGACGCCCA ACTGGCCGAC ATCCCAGGCC CCCGCGCCAA GATCCTCGCC TCCTTCGACG TCCTCGCCGC CTGGATGGGC GACAACTACC GAGGCTGCGC CATGGTCAAC GCCTACGCCG AACTGGCCGA CCCCACCCAC CCCGCCCGAG CCGTGTCCAC CGACCAGAAG AAATGGCTCA AGAACCTGTT CACCGACCTG CTCACCCAAG CCGGAATCAA CGACGAACAC CTCGCCGTCC AACTGGTGAT GCTGCACGAA GGCTCGGTCG TGGCCGCCTA CGTCGGCGGC ATGACGACCG CGGTCGCCGC CGCCCGACAG GCGGCGGCGA CCCTATTGGA CACTCACGGT GAATAG
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Protein sequence | MPTVTPPRLT PAARRVLDVA STLFYERGIN TVGMDLIAAT AKVTKKTIYD RFGSKEALVT AYLSERDHTW RRHLDAQLAD IPGPRAKILA SFDVLAAWMG DNYRGCAMVN AYAELADPTH PARAVSTDQK KWLKNLFTDL LTQAGINDEH LAVQLVMLHE GSVVAAYVGG MTTAVAAARQ AAATLLDTHG E
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