Gene Snas_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3230 
Symbol 
ID8884429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3410008 
End bp3410583 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003511993 
Protein GI291300715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0704446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000846551 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGACCG TCACCCCACC CCGCCTGACC CCCGCCGCCC GCCGCGTCCT CGACGTGGCC 
AGCACCCTGT TCTACGAACG CGGCATCAAC ACCGTCGGCA TGGACCTCAT CGCCGCCACC
GCCAAGGTCA CCAAGAAAAC CATCTACGAC CGCTTCGGCT CCAAAGAAGC CCTGGTCACC
GCGTACCTGT CCGAACGCGA CCACACCTGG CGCCGCCACC TCGACGCCCA ACTGGCCGAC
ATCCCAGGCC CCCGCGCCAA GATCCTCGCC TCCTTCGACG TCCTCGCCGC CTGGATGGGC
GACAACTACC GAGGCTGCGC CATGGTCAAC GCCTACGCCG AACTGGCCGA CCCCACCCAC
CCCGCCCGAG CCGTGTCCAC CGACCAGAAG AAATGGCTCA AGAACCTGTT CACCGACCTG
CTCACCCAAG CCGGAATCAA CGACGAACAC CTCGCCGTCC AACTGGTGAT GCTGCACGAA
GGCTCGGTCG TGGCCGCCTA CGTCGGCGGC ATGACGACCG CGGTCGCCGC CGCCCGACAG
GCGGCGGCGA CCCTATTGGA CACTCACGGT GAATAG
 
Protein sequence
MPTVTPPRLT PAARRVLDVA STLFYERGIN TVGMDLIAAT AKVTKKTIYD RFGSKEALVT 
AYLSERDHTW RRHLDAQLAD IPGPRAKILA SFDVLAAWMG DNYRGCAMVN AYAELADPTH
PARAVSTDQK KWLKNLFTDL LTQAGINDEH LAVQLVMLHE GSVVAAYVGG MTTAVAAARQ
AAATLLDTHG E