Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3222 |
Symbol | |
ID | 8884421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3402244 |
End bp | 3402858 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003511985 |
Protein GI | 291300707 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.067896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000207795 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGGACG CCATGCCACA AGCGACCGAC GAGCGGCCCT ACCACCACGG CAACCTGCGC ACCGCGCTAC TGGAAGCCGC CCAGGCGTCC CTGCGCGAAC ACGGCGCCGC CCAGCTGTCC CTGCGCGACC TCGCCCGCGA AGTCGGCGTC AGCCACGCCG CCCCGCGCCG CCACTTCCCC GACCGCCAGG CCCTGCTCGA CGCGCTCGCC GAAAACGGAT TCACCCAACT CGACACGATC CTGCGCACCG CCTGCGCCGA CGCCGGCGAC GACTTCGCCG CTCGACTGCG CGCCACCATG ACCGCCTACA CCCGCTTCGC CACCGACAAC GCCGCCCTGC TGGAGCTGAT GTACACCAGC AAACACCGCC CCGGCGCCAC TGCCATCGTC AAAGCCGCCG AAGCCCCGTT CCAGCTCATG ATCGAACTCC TCCAGCAAGG CCAAGCCCAA GGCGCGCTCC CCTCAGGCGC TCCCGAACGC ATCGGCATCA TCCTGTTCGC GACCCTGCAG GGCATCGCCT CCCTCATCAA CGGCAACTTC GTCGAGGCCG ACCTCCTCGA CGAACTCGTC GACACCGCCG TCGAACAGTT CCTCCACGGC GCCCGCCCCG CCTGA
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Protein sequence | MVDAMPQATD ERPYHHGNLR TALLEAAQAS LREHGAAQLS LRDLAREVGV SHAAPRRHFP DRQALLDALA ENGFTQLDTI LRTACADAGD DFAARLRATM TAYTRFATDN AALLELMYTS KHRPGATAIV KAAEAPFQLM IELLQQGQAQ GALPSGAPER IGIILFATLQ GIASLINGNF VEADLLDELV DTAVEQFLHG ARPA
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