Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3173 |
Symbol | |
ID | 8884372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3354961 |
End bp | 3355872 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | 5'-3' exonuclease |
Protein accession | YP_003511937 |
Protein GI | 291300659 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0156047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000759787 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGGTCC TCGTCGACGC CCCCGGGCTG TGGTACCGAT CCTTCTACGG CCTGCCCTCC TCCCTACGCG GACCCGACGG CACCCAGATC AACGCCGTAC GCGGCTTCAT CGACGGACTG GCCACCCTCA TCCGCAACCA CAACGCCACC GGCCTGGCCT GCGCCGTCGA CAACGACTGG CGCCCCGCCT GGCGCGTCGA CCTGCTACCC AGCTACAAAA CCCACCGCCT CGCCGACAAC GGCGGCGAAG AAGAACCCGA CGCCCTACCC CACCAGGTCG CCATCATCAC CCAACTGCTC ACCGCCTGGG GCATCCCCGT CATCGGCGTC GACGGCTACG AAGCCGACGA CGTCCTGGCC ACCCTCGCCA CCACCACCAA AGGCCCCGTC GGTGTGGCCA CCGGCGACCG CGACCTGTTC CAACTCATCG ACGACGACAA CGACATCCGC GTCATCTACT TCGGACGCGG CATCGCCAAA GCCGAAACCC TCGACGACGC CGCACTGGTG GCTCGCCACG GCGTCCACCC CGACCAGTAC GTCGACTTCG CCGTCCTGCG CGGCGACCCC TCCGACGGCC TGCCCGGCGT CAAGGGCATC GGCGACAAGA CCGCCGCCAC CCTCATCACC ACCCACGGCA ACCTCACCGA CGCCCGCGCG GCCGCCGCCG ACCCGGCCAC CACCATGGCA CCCCGGGTCC GCAAAGCCCT CACCGAATCC GGCGAATACC TCGACGCCGC GGTCAAGGTC GTGCGCACCG CCAACGACGC ACCCGTGCCC GACATCGACC CCAGCCTGCG ACCCGAACCC GCCGACCCGC AAGCCGTCGA AACCCTCAGC GACACCTACG GCCTCGCCAA CAGCCTCAAC CGGCTACGCG AAGCCCTCAC CGCCGCCACC GGCAACAGCT AA
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Protein sequence | MLVLVDAPGL WYRSFYGLPS SLRGPDGTQI NAVRGFIDGL ATLIRNHNAT GLACAVDNDW RPAWRVDLLP SYKTHRLADN GGEEEPDALP HQVAIITQLL TAWGIPVIGV DGYEADDVLA TLATTTKGPV GVATGDRDLF QLIDDDNDIR VIYFGRGIAK AETLDDAALV ARHGVHPDQY VDFAVLRGDP SDGLPGVKGI GDKTAATLIT THGNLTDARA AAADPATTMA PRVRKALTES GEYLDAAVKV VRTANDAPVP DIDPSLRPEP ADPQAVETLS DTYGLANSLN RLREALTAAT GNS
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