Gene Snas_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3173 
Symbol 
ID8884372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3354961 
End bp3355872 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID 
Product5'-3' exonuclease 
Protein accessionYP_003511937 
Protein GI291300659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0156047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000759787 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGTCC TCGTCGACGC CCCCGGGCTG TGGTACCGAT CCTTCTACGG CCTGCCCTCC 
TCCCTACGCG GACCCGACGG CACCCAGATC AACGCCGTAC GCGGCTTCAT CGACGGACTG
GCCACCCTCA TCCGCAACCA CAACGCCACC GGCCTGGCCT GCGCCGTCGA CAACGACTGG
CGCCCCGCCT GGCGCGTCGA CCTGCTACCC AGCTACAAAA CCCACCGCCT CGCCGACAAC
GGCGGCGAAG AAGAACCCGA CGCCCTACCC CACCAGGTCG CCATCATCAC CCAACTGCTC
ACCGCCTGGG GCATCCCCGT CATCGGCGTC GACGGCTACG AAGCCGACGA CGTCCTGGCC
ACCCTCGCCA CCACCACCAA AGGCCCCGTC GGTGTGGCCA CCGGCGACCG CGACCTGTTC
CAACTCATCG ACGACGACAA CGACATCCGC GTCATCTACT TCGGACGCGG CATCGCCAAA
GCCGAAACCC TCGACGACGC CGCACTGGTG GCTCGCCACG GCGTCCACCC CGACCAGTAC
GTCGACTTCG CCGTCCTGCG CGGCGACCCC TCCGACGGCC TGCCCGGCGT CAAGGGCATC
GGCGACAAGA CCGCCGCCAC CCTCATCACC ACCCACGGCA ACCTCACCGA CGCCCGCGCG
GCCGCCGCCG ACCCGGCCAC CACCATGGCA CCCCGGGTCC GCAAAGCCCT CACCGAATCC
GGCGAATACC TCGACGCCGC GGTCAAGGTC GTGCGCACCG CCAACGACGC ACCCGTGCCC
GACATCGACC CCAGCCTGCG ACCCGAACCC GCCGACCCGC AAGCCGTCGA AACCCTCAGC
GACACCTACG GCCTCGCCAA CAGCCTCAAC CGGCTACGCG AAGCCCTCAC CGCCGCCACC
GGCAACAGCT AA
 
Protein sequence
MLVLVDAPGL WYRSFYGLPS SLRGPDGTQI NAVRGFIDGL ATLIRNHNAT GLACAVDNDW 
RPAWRVDLLP SYKTHRLADN GGEEEPDALP HQVAIITQLL TAWGIPVIGV DGYEADDVLA
TLATTTKGPV GVATGDRDLF QLIDDDNDIR VIYFGRGIAK AETLDDAALV ARHGVHPDQY
VDFAVLRGDP SDGLPGVKGI GDKTAATLIT THGNLTDARA AAADPATTMA PRVRKALTES
GEYLDAAVKV VRTANDAPVP DIDPSLRPEP ADPQAVETLS DTYGLANSLN RLREALTAAT
GNS