Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3170 |
Symbol | |
ID | 8884369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3349742 |
End bp | 3350197 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003511934 |
Protein GI | 291300656 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.11515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000757485 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGTCACTC AGGATGAGCG CGAAGAACTG ATCTCCAACA TCTCGGCCCT GCAACGGGAC ATGGCGCGGC ATTTCGCCCA CGACCGGACA ATGCCGCTGT TGGCGTCGTC GCTGACGATG CAGCAGTTCA AGATCCTCAT CATCCTGACC ACACAGGACG ACCTGGCCGG GCAGGAACTG GCCGAACGCC TGGGCGTCAA ACTGGGCACC GTCACCGGCA TCGTCGACCG CCTCGTCGCC CAGGATCTGG TGCGCCGCAC CGAAGACGTC CACGACCGCC GGATCCGGCG GGTGTCGCTG ACCGACGAGG GCCTGGACCT GATGGAGGAG ATCACCGACA ACGGCCTGTC GCAGTTCCGC AAGATCCTCG GCGAACTCGA CACCGACGAA CTGCGCCAGA CCCTCCACGT CACACAGGTG TTGCGCGACG CCGCCATCCG GCTGAACGAC TCGTAG
|
Protein sequence | MVTQDEREEL ISNISALQRD MARHFAHDRT MPLLASSLTM QQFKILIILT TQDDLAGQEL AERLGVKLGT VTGIVDRLVA QDLVRRTEDV HDRRIRRVSL TDEGLDLMEE ITDNGLSQFR KILGELDTDE LRQTLHVTQV LRDAAIRLND S
|
| |