Gene Snas_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3170 
Symbol 
ID8884369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3349742 
End bp3350197 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content65% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003511934 
Protein GI291300656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.11515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000757485 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTCACTC AGGATGAGCG CGAAGAACTG ATCTCCAACA TCTCGGCCCT GCAACGGGAC 
ATGGCGCGGC ATTTCGCCCA CGACCGGACA ATGCCGCTGT TGGCGTCGTC GCTGACGATG
CAGCAGTTCA AGATCCTCAT CATCCTGACC ACACAGGACG ACCTGGCCGG GCAGGAACTG
GCCGAACGCC TGGGCGTCAA ACTGGGCACC GTCACCGGCA TCGTCGACCG CCTCGTCGCC
CAGGATCTGG TGCGCCGCAC CGAAGACGTC CACGACCGCC GGATCCGGCG GGTGTCGCTG
ACCGACGAGG GCCTGGACCT GATGGAGGAG ATCACCGACA ACGGCCTGTC GCAGTTCCGC
AAGATCCTCG GCGAACTCGA CACCGACGAA CTGCGCCAGA CCCTCCACGT CACACAGGTG
TTGCGCGACG CCGCCATCCG GCTGAACGAC TCGTAG
 
Protein sequence
MVTQDEREEL ISNISALQRD MARHFAHDRT MPLLASSLTM QQFKILIILT TQDDLAGQEL 
AERLGVKLGT VTGIVDRLVA QDLVRRTEDV HDRRIRRVSL TDEGLDLMEE ITDNGLSQFR
KILGELDTDE LRQTLHVTQV LRDAAIRLND S