Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3164 |
Symbol | |
ID | 8884363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3341966 |
End bp | 3342592 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | peptidase C60 sortase A and B |
Protein accession | YP_003511928 |
Protein GI | 291300650 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0992718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000126147 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCGGTGT GCCTGACGCT GACGGTGATC GCGGCGGCCG GTTGCGGGCT GATGCTGGGG GCGTTGACGC CGCTGCCGAG CACCTCGCCG CAGCCGCAGG CGGTACCGGT CCCGCCCAGT GTGCCGCCGG TGCCGTCGCT GTCGCCCGGC CAAATCGCGC CACCGGGCCT GTCACGGTCG ACCCCGACGG TGGTCGATAT CGCCGCCATC GGCGTGCACT CGCCGGTCAC GCCGGTGGGA CTGGACCGCG ACGGCACCAT CGAGGCCCCC GACCTGGACC AACCGCACCA GACCGGCTGG TACAGCCACG GCCCCGCGCC CGGCCAGATC GGGACGGCGG CCCTGGTCGG ACACGTCGAC TCGCGGCGCA GCGGCGCTGC GGTGTTCTAC GACCTGGGGT CGCTGGAGAC CGGCGACTCC ATCGTCGTGT CCCGCCGCGA CGGCCGCGAC GTCACCTTCA CCGTCGACCT GGTCGAGTCC TACCCGAAGA AGAAGTTCCC CTACGGGGCG GTGTTCACCA ACACCGGCTA CGCCGCGCTG CGGCTGATCA CCTGCGGCGG GAACTTCGAC ACCAAGCGCC GCAGCTACAC CCACAACATC GTGGTGTACG CGACCATGGC CACCTGA
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Protein sequence | MAVCLTLTVI AAAGCGLMLG ALTPLPSTSP QPQAVPVPPS VPPVPSLSPG QIAPPGLSRS TPTVVDIAAI GVHSPVTPVG LDRDGTIEAP DLDQPHQTGW YSHGPAPGQI GTAALVGHVD SRRSGAAVFY DLGSLETGDS IVVSRRDGRD VTFTVDLVES YPKKKFPYGA VFTNTGYAAL RLITCGGNFD TKRRSYTHNI VVYATMAT
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