Gene Snas_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3164 
Symbol 
ID8884363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3341966 
End bp3342592 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID 
Productpeptidase C60 sortase A and B 
Protein accessionYP_003511928 
Protein GI291300650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0992718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000126147 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGGTGT GCCTGACGCT GACGGTGATC GCGGCGGCCG GTTGCGGGCT GATGCTGGGG 
GCGTTGACGC CGCTGCCGAG CACCTCGCCG CAGCCGCAGG CGGTACCGGT CCCGCCCAGT
GTGCCGCCGG TGCCGTCGCT GTCGCCCGGC CAAATCGCGC CACCGGGCCT GTCACGGTCG
ACCCCGACGG TGGTCGATAT CGCCGCCATC GGCGTGCACT CGCCGGTCAC GCCGGTGGGA
CTGGACCGCG ACGGCACCAT CGAGGCCCCC GACCTGGACC AACCGCACCA GACCGGCTGG
TACAGCCACG GCCCCGCGCC CGGCCAGATC GGGACGGCGG CCCTGGTCGG ACACGTCGAC
TCGCGGCGCA GCGGCGCTGC GGTGTTCTAC GACCTGGGGT CGCTGGAGAC CGGCGACTCC
ATCGTCGTGT CCCGCCGCGA CGGCCGCGAC GTCACCTTCA CCGTCGACCT GGTCGAGTCC
TACCCGAAGA AGAAGTTCCC CTACGGGGCG GTGTTCACCA ACACCGGCTA CGCCGCGCTG
CGGCTGATCA CCTGCGGCGG GAACTTCGAC ACCAAGCGCC GCAGCTACAC CCACAACATC
GTGGTGTACG CGACCATGGC CACCTGA
 
Protein sequence
MAVCLTLTVI AAAGCGLMLG ALTPLPSTSP QPQAVPVPPS VPPVPSLSPG QIAPPGLSRS 
TPTVVDIAAI GVHSPVTPVG LDRDGTIEAP DLDQPHQTGW YSHGPAPGQI GTAALVGHVD
SRRSGAAVFY DLGSLETGDS IVVSRRDGRD VTFTVDLVES YPKKKFPYGA VFTNTGYAAL
RLITCGGNFD TKRRSYTHNI VVYATMAT