| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3134 |
|---|
| Symbol | |
|---|
| ID | 8884333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 3309292 |
|---|
| End bp | 3309942 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_003511898 |
|---|
| Protein GI | 291300620 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.275883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0207681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACA CCGGTGACGT GTACCCCGGC GGACCCGCCG CGATACGGGA ACTGGAAACG
CTGACCATCA CCAAGTTCTC GGTCAGCATG ATGGACAACA ACGTGTATCT GTTGCGCTGC
CGCGCAACCG GGCAACAGCT GCTCATCGAC GCGGCCGACG AACCCGAGCG GATCATGGAG
TTCGTGGGCG ACGCCGGGCT TTCCACTGTG GTGACGACGC ACCGGCACTG GGATCACATC
CGGGCCACCG CCGCGATCGT CGAGCGCACC GGCGCCGCGA GTCTCGCGCA TCCCGCCGAC
GCCGGGGACG TCCCGGCAGT AACGGGAACC GTCGACGACG GCGGCACCAT CTCCTGTGGA
GACGTCACGA TCGAGGCGAT CCACCTGGCC GGGCACACCC CGGGCGGGTT GGCGCTGCTG
TACCGGGATC CGGGCGGGCA CCCGCACCTG TTCACGGGCG ACAGCCTGTT CCCCGGCGGG
GTCGGCAAGA CCCAGACGGC CGCCGACTTC GACTCGCTGT ACACCGACGT GGAGACGAAG
GTGTTCGGAC GGCTGCCCGA CGACACCTGG GTGTACCCGG GCCACGGCGA CGACACCACG
CTGGGCGCCG AACGGCCGAA GCTGCCCGAA TGGCGCGCTC GCGGCTGGTG A
|
|---|
| Protein sequence | MEYTGDVYPG GPAAIRELET LTITKFSVSM MDNNVYLLRC RATGQQLLID AADEPERIME
FVGDAGLSTV VTTHRHWDHI RATAAIVERT GAASLAHPAD AGDVPAVTGT VDDGGTISCG
DVTIEAIHLA GHTPGGLALL YRDPGGHPHL FTGDSLFPGG VGKTQTAADF DSLYTDVETK
VFGRLPDDTW VYPGHGDDTT LGAERPKLPE WRARGW
|
|---|
| |