Gene Snas_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3125 
Symbol 
ID8884324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3299759 
End bp3301255 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content72% 
IMG OID 
Productcarbohydrate kinase FGGY 
Protein accessionYP_003511889 
Protein GI291300611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0202621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00600222 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGGCG ACAACGCGAT ACTGCTGGGC GTCGACATCG GCACGTCCAG TTCCAAGGCG 
GTCGCGGTGG ACCGGCGCGG GTCGATCCTG GCCCGCGCCG AACGCGCCCA CGAGACCGCC
ACCCCGCACC CGGGTTGGTT CGAGCACGAC GCCGAGACGG TGTGGTGGGA CGACTTCCGG
TACCTGGTCG GCCGGTTGCT GGAACACGTC GACGGCCGCG ACATCGCGGG GCTGGCCACC
AGCGGTATCG GTCCGGTGCT GCTGCCCGCC GACGGCGACG GCCGTCCGTT GCGTCCGGCG
ATCCTGTACG GGGTCGACAC CCGTGCCAGC GCCGAGATCG ACGAGCTCGA CGCCGAGTTC
GGGGCCGAGG CCATCATGGA GCGGGGCGGT ACTCCCCTGT CCAGTCAGGC CGTCGGCCCC
AAGATCCGCT GGCTGGCCAA GCACGAGCCG GATGTGTGGC GGCGCACCGA GAAGCTGTTG
ATGGCCAGTT CCTATCTGGT GCACCGGCTC ACCGGCGAGT ACGTGCTGGA CCATCATTCG
GCCAGCCAGT GCGACCCGCT CTACGATCAG CGGTCCTTCG GCTGGGCGCG TGACTGGGCC
GAGAAGGTGG CGCCGGGGCT GGCGCTGCCA CGGCTGGCCT GGCCCGGCGA GGTGGTGGGT
GCGGTGTCGG CCACGGCCGC CGCCGCGACC GGGCTGCCCC GGGATCTGCC GGTCATGGCG
GGCACGGTGG ACGCGTGGGC CGAGTCGGTC AGCGTCGGGG TGCGCGAGCC CGGCGAGACC
ATGGTCATGT ACGGCACCAC CATGTTCATC GTCAACGTGG CCGCCGATCC GCGACCGCAT
CGGGGACTGT GGACCACCAG CGGCGCGATG CCGGGCACGT TCTCACTGGC GGCGGGCATG
GCCACCTCCG GGTCGGTCAC CGACTGGCTG CGGCGGCTGG TCGGCGGCGA CTTCGCCGAG
CTGACCGCGG CGGCGGCCAC GGTCCCGGCC GGGAGCCGGG GACTGCTGCT GTTGCCGTAC
TTCGCGGGCG AACGTACCCC GATCTTCGAT CCGGAGGCCC GGGGCGTGAT CGCGGGGCTG
ACGCTGGCGC ATGGACCGGC GGAGCTGTAC CGGGCGGCGC TGGAGGGGAT CGCCCACGGG
GTGCGGCACA ACCTGGAGAC CATGGCCTCG GCGCACGGTT CGATCGAGCG GCTGGTGGCC
GTCGGCGGCG GCACCAAGGG TGGACTGTGG ACGCAGATCG TGTCCGATGT GACCAATCAG
GCACAGGACA TCCCGTCGCA CACCATCGGC GCCTGCCTGG GCGACGCGAT GCTGGCCGCG
CACGGGCTCG GCCTCGACGT CGACCTGGCG GCGTGGAACC CCGTGACCGC GACCGTACGG
CCGGATCCGG CGCGGGCGGA GGCGTACGAC GCGTTCTACC GGCACTATCG CGAGCTCTAC
CCGGCCACGA GCGACGTCGC GCATTTCCTG GCGCACCAGC AGAAGCTGGC GGACTGA
 
Protein sequence
MTGDNAILLG VDIGTSSSKA VAVDRRGSIL ARAERAHETA TPHPGWFEHD AETVWWDDFR 
YLVGRLLEHV DGRDIAGLAT SGIGPVLLPA DGDGRPLRPA ILYGVDTRAS AEIDELDAEF
GAEAIMERGG TPLSSQAVGP KIRWLAKHEP DVWRRTEKLL MASSYLVHRL TGEYVLDHHS
ASQCDPLYDQ RSFGWARDWA EKVAPGLALP RLAWPGEVVG AVSATAAAAT GLPRDLPVMA
GTVDAWAESV SVGVREPGET MVMYGTTMFI VNVAADPRPH RGLWTTSGAM PGTFSLAAGM
ATSGSVTDWL RRLVGGDFAE LTAAAATVPA GSRGLLLLPY FAGERTPIFD PEARGVIAGL
TLAHGPAELY RAALEGIAHG VRHNLETMAS AHGSIERLVA VGGGTKGGLW TQIVSDVTNQ
AQDIPSHTIG ACLGDAMLAA HGLGLDVDLA AWNPVTATVR PDPARAEAYD AFYRHYRELY
PATSDVAHFL AHQQKLAD