Gene Snas_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3119 
Symbol 
ID8884318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3293868 
End bp3295019 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511883 
Protein GI291300605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.274638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00609959 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTCGC TCTCGCACCG CTTCGCTGTG GCCGTCAGCG TGATCGCCGC CCTGGTCGTG 
GTCACCGCGA TCCAGGTTTG CGGCGGCGGC CGTGCCGAGG CCGAAACCTC GGGCTGCGCG
ACCGACGGCC GGTACCGGGT GTGCACCACC AATCCCGACA CGGTCGCGGG CGGGCAGGAC
TTCACCATCG TCGACGAGGT CCAGCGTCAG ATCCGTGGCG CCAAGAAGGG TGGCGAGATC
CGCATCGCCA TGTACAAGCT GATGCTCAAA CGGGTCGCCT ACGACCTGGT GGACGCCCAG
CGGCGCGGTG TTGACGTCAA GGTCGTGGTC GGCACCAACG ACAACCACCC CGACCGCAAC
GTCGAGGCCG TCCGGATCCT GCGCTCCGGC GGTGTGAAGG TCGTCGAATG CGTCGAAGGC
TGCCTGCCCA ACCGGGACGG ACGGCATCGC GGCGCCATGC ACAACAAGTT CCTCATCGTC
AGAAGCGCCG GTGGTACGAC CGTCACCCAG ACCTCGTCGA ACCTTTCCAG CCCGCAGACC
GAATGGCACC AGAACCTGCT GTCCATACGC GACGACCATG CGCTGTACCG CTACTACCTC
GCCTACTGGC AGCGGCTGGC CGCCGGGTCG TGGACCGTCG GCGGCGATAC CTGGATCGGC
GGCGATCGTT CCGGCAGGGG AGATCACGAC ATGTCGAGGG CGTATGTCTT CCCGGTGACC
TCCGGCGACC CGATCACGGC GATCCTCGAC GATGTCACCG ACTGCCGCCG CGGCGATGAC
CGTATCTGGG TCACCCACAA CATCACCGAA CGCGTCGGCG TGCGCAACCG TCTCATCGAA
CTGCACAACG CCGGTTGCGA TGTCAGGGTG GTGACGGGCA AGACCGACAA CGAGGAGTTC
ATGCAGTCAC ACGTTCGCGG CCTGGGACAT CTGGACGCCG ACAAGGTCAG GCGACTTCGC
GGCACCCACA ACAAGTTCGT CGTCATCGAC GCCAAGTACG CGGGCCAATG GCGCAAGGTC
GTCGTGACCG GCTCGCACAA CTTGAGCTAC AGCGCGTTGA AGAACGCCAA CGACGTCGTC
CTCCGTGTTG TCCACAATGG TGTTGCCGAC GAGTATTTCG GCTACTTCAG GCAGCTGTAC
CAGTCAGCAT GA
 
Protein sequence
MKSLSHRFAV AVSVIAALVV VTAIQVCGGG RAEAETSGCA TDGRYRVCTT NPDTVAGGQD 
FTIVDEVQRQ IRGAKKGGEI RIAMYKLMLK RVAYDLVDAQ RRGVDVKVVV GTNDNHPDRN
VEAVRILRSG GVKVVECVEG CLPNRDGRHR GAMHNKFLIV RSAGGTTVTQ TSSNLSSPQT
EWHQNLLSIR DDHALYRYYL AYWQRLAAGS WTVGGDTWIG GDRSGRGDHD MSRAYVFPVT
SGDPITAILD DVTDCRRGDD RIWVTHNITE RVGVRNRLIE LHNAGCDVRV VTGKTDNEEF
MQSHVRGLGH LDADKVRRLR GTHNKFVVID AKYAGQWRKV VVTGSHNLSY SALKNANDVV
LRVVHNGVAD EYFGYFRQLY QSA