Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3119 |
Symbol | |
ID | 8884318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3293868 |
End bp | 3295019 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003511883 |
Protein GI | 291300605 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.274638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00609959 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTCGC TCTCGCACCG CTTCGCTGTG GCCGTCAGCG TGATCGCCGC CCTGGTCGTG GTCACCGCGA TCCAGGTTTG CGGCGGCGGC CGTGCCGAGG CCGAAACCTC GGGCTGCGCG ACCGACGGCC GGTACCGGGT GTGCACCACC AATCCCGACA CGGTCGCGGG CGGGCAGGAC TTCACCATCG TCGACGAGGT CCAGCGTCAG ATCCGTGGCG CCAAGAAGGG TGGCGAGATC CGCATCGCCA TGTACAAGCT GATGCTCAAA CGGGTCGCCT ACGACCTGGT GGACGCCCAG CGGCGCGGTG TTGACGTCAA GGTCGTGGTC GGCACCAACG ACAACCACCC CGACCGCAAC GTCGAGGCCG TCCGGATCCT GCGCTCCGGC GGTGTGAAGG TCGTCGAATG CGTCGAAGGC TGCCTGCCCA ACCGGGACGG ACGGCATCGC GGCGCCATGC ACAACAAGTT CCTCATCGTC AGAAGCGCCG GTGGTACGAC CGTCACCCAG ACCTCGTCGA ACCTTTCCAG CCCGCAGACC GAATGGCACC AGAACCTGCT GTCCATACGC GACGACCATG CGCTGTACCG CTACTACCTC GCCTACTGGC AGCGGCTGGC CGCCGGGTCG TGGACCGTCG GCGGCGATAC CTGGATCGGC GGCGATCGTT CCGGCAGGGG AGATCACGAC ATGTCGAGGG CGTATGTCTT CCCGGTGACC TCCGGCGACC CGATCACGGC GATCCTCGAC GATGTCACCG ACTGCCGCCG CGGCGATGAC CGTATCTGGG TCACCCACAA CATCACCGAA CGCGTCGGCG TGCGCAACCG TCTCATCGAA CTGCACAACG CCGGTTGCGA TGTCAGGGTG GTGACGGGCA AGACCGACAA CGAGGAGTTC ATGCAGTCAC ACGTTCGCGG CCTGGGACAT CTGGACGCCG ACAAGGTCAG GCGACTTCGC GGCACCCACA ACAAGTTCGT CGTCATCGAC GCCAAGTACG CGGGCCAATG GCGCAAGGTC GTCGTGACCG GCTCGCACAA CTTGAGCTAC AGCGCGTTGA AGAACGCCAA CGACGTCGTC CTCCGTGTTG TCCACAATGG TGTTGCCGAC GAGTATTTCG GCTACTTCAG GCAGCTGTAC CAGTCAGCAT GA
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Protein sequence | MKSLSHRFAV AVSVIAALVV VTAIQVCGGG RAEAETSGCA TDGRYRVCTT NPDTVAGGQD FTIVDEVQRQ IRGAKKGGEI RIAMYKLMLK RVAYDLVDAQ RRGVDVKVVV GTNDNHPDRN VEAVRILRSG GVKVVECVEG CLPNRDGRHR GAMHNKFLIV RSAGGTTVTQ TSSNLSSPQT EWHQNLLSIR DDHALYRYYL AYWQRLAAGS WTVGGDTWIG GDRSGRGDHD MSRAYVFPVT SGDPITAILD DVTDCRRGDD RIWVTHNITE RVGVRNRLIE LHNAGCDVRV VTGKTDNEEF MQSHVRGLGH LDADKVRRLR GTHNKFVVID AKYAGQWRKV VVTGSHNLSY SALKNANDVV LRVVHNGVAD EYFGYFRQLY QSA
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