Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3115 |
Symbol | |
ID | 8884314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3289708 |
End bp | 3290685 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Acetyl xylan esterase |
Protein accession | YP_003511879 |
Protein GI | 291300601 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0185974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0232886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTGT TCGATTTCCC GCTGGACGAG CTGCGCGCCT ATCGGCCCGA ACCCGATGAG CCCCAGGACT TCGACGCGTT CTGGGACCGC ACCTCCGAGG TCGCGGACCG GCATCCGCTG GACGTCCGGT TGACGCCGCA GCCGGGGCAT CTGGGCTTGG TGGACGTGTG GGACGTGCGG TTCGCGGGCT GGAATGGTGA CCCGATCAAC GCCTGGCTGA TCGCTCCGGC CGGGGCGAGC CGGGTGGGGT GCGTGGTCAC GTACATCGGG TATCACGGGG GCCGGGGGTT TCCGCACCAG CATCTGCGGT GGCCCGTCGC CGGGTGGGCG ACGCTGGTGG TGGACACGCG GGGGCAGGGT GCGTCGGCTT CGGCATCGTC GGGCGTTACC GGTGACCCGC ACGGCAGCGA GTTCGGGCAC GCTCCGGGGA TGCTCACCAA GGGCATCCTG GATCCGGACG AGTACTACTA CCGGCGGGTC TTCACCGACG CGGCGCGGGC GGTGGACGTG GCCGCGTCAC TGGACATCGT GGACGAGTCG CGGATCGTGG TGTCCGGGCA TTCGCAGGGG GGCGGCATCG CGCAGGCGGT GTCGGCGTTG CGGCCGGGGG TGGCCGCGGC GTTGGTCAAC GAGCCGTTCC TGTGTCACTT CCGGCGTTCG TGCGAGATCG CCTCCACCGG CCCGTATCCG GAGCTCGTCG CGTTCCTGGG TGCGCAGCGG GATCTGGAGC AGCGGGTGTT CGCGACACTG TCCTACTTCG AGGGTATGAG TTTCGCGTCG CGGGCCCAGG CACCGGCGCT GTACTCGGTG GCCCTCATGG ACACCACGTG TCCACCCTCG ACGGTGTTCG CGGCCTACAA CCGTTGGGCG GGACCGAAGG ACATCGAGGT GTGGCCGTGG AACGGGCACT CCGGCGGCGA GGGGTACCAC GCGCAGCGGC AGCTGGAGTG GCTGAGCGAA CGCTTCGGGA CGGGCTGA
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Protein sequence | MPLFDFPLDE LRAYRPEPDE PQDFDAFWDR TSEVADRHPL DVRLTPQPGH LGLVDVWDVR FAGWNGDPIN AWLIAPAGAS RVGCVVTYIG YHGGRGFPHQ HLRWPVAGWA TLVVDTRGQG ASASASSGVT GDPHGSEFGH APGMLTKGIL DPDEYYYRRV FTDAARAVDV AASLDIVDES RIVVSGHSQG GGIAQAVSAL RPGVAAALVN EPFLCHFRRS CEIASTGPYP ELVAFLGAQR DLEQRVFATL SYFEGMSFAS RAQAPALYSV ALMDTTCPPS TVFAAYNRWA GPKDIEVWPW NGHSGGEGYH AQRQLEWLSE RFGTG
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