Gene Snas_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3115 
Symbol 
ID8884314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3289708 
End bp3290685 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID 
ProductAcetyl xylan esterase 
Protein accessionYP_003511879 
Protein GI291300601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0185974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0232886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTGT TCGATTTCCC GCTGGACGAG CTGCGCGCCT ATCGGCCCGA ACCCGATGAG 
CCCCAGGACT TCGACGCGTT CTGGGACCGC ACCTCCGAGG TCGCGGACCG GCATCCGCTG
GACGTCCGGT TGACGCCGCA GCCGGGGCAT CTGGGCTTGG TGGACGTGTG GGACGTGCGG
TTCGCGGGCT GGAATGGTGA CCCGATCAAC GCCTGGCTGA TCGCTCCGGC CGGGGCGAGC
CGGGTGGGGT GCGTGGTCAC GTACATCGGG TATCACGGGG GCCGGGGGTT TCCGCACCAG
CATCTGCGGT GGCCCGTCGC CGGGTGGGCG ACGCTGGTGG TGGACACGCG GGGGCAGGGT
GCGTCGGCTT CGGCATCGTC GGGCGTTACC GGTGACCCGC ACGGCAGCGA GTTCGGGCAC
GCTCCGGGGA TGCTCACCAA GGGCATCCTG GATCCGGACG AGTACTACTA CCGGCGGGTC
TTCACCGACG CGGCGCGGGC GGTGGACGTG GCCGCGTCAC TGGACATCGT GGACGAGTCG
CGGATCGTGG TGTCCGGGCA TTCGCAGGGG GGCGGCATCG CGCAGGCGGT GTCGGCGTTG
CGGCCGGGGG TGGCCGCGGC GTTGGTCAAC GAGCCGTTCC TGTGTCACTT CCGGCGTTCG
TGCGAGATCG CCTCCACCGG CCCGTATCCG GAGCTCGTCG CGTTCCTGGG TGCGCAGCGG
GATCTGGAGC AGCGGGTGTT CGCGACACTG TCCTACTTCG AGGGTATGAG TTTCGCGTCG
CGGGCCCAGG CACCGGCGCT GTACTCGGTG GCCCTCATGG ACACCACGTG TCCACCCTCG
ACGGTGTTCG CGGCCTACAA CCGTTGGGCG GGACCGAAGG ACATCGAGGT GTGGCCGTGG
AACGGGCACT CCGGCGGCGA GGGGTACCAC GCGCAGCGGC AGCTGGAGTG GCTGAGCGAA
CGCTTCGGGA CGGGCTGA
 
Protein sequence
MPLFDFPLDE LRAYRPEPDE PQDFDAFWDR TSEVADRHPL DVRLTPQPGH LGLVDVWDVR 
FAGWNGDPIN AWLIAPAGAS RVGCVVTYIG YHGGRGFPHQ HLRWPVAGWA TLVVDTRGQG
ASASASSGVT GDPHGSEFGH APGMLTKGIL DPDEYYYRRV FTDAARAVDV AASLDIVDES
RIVVSGHSQG GGIAQAVSAL RPGVAAALVN EPFLCHFRRS CEIASTGPYP ELVAFLGAQR
DLEQRVFATL SYFEGMSFAS RAQAPALYSV ALMDTTCPPS TVFAAYNRWA GPKDIEVWPW
NGHSGGEGYH AQRQLEWLSE RFGTG