Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3112 |
Symbol | |
ID | 8884311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3284314 |
End bp | 3285138 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003511876 |
Protein GI | 291300598 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.240687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.181566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACCC TGCGGCTGCG CTGGGGCACC GCCCTCACCC TGACCGTCGG CGGCCTGTTC GGCGTCGCCG CCGTCGGCTG GCCACTGCTG ATCACCCCCT CCTCGCACCT GTCCGAGGGC CTCACCGGCC CGTGGCTGTT CGCCGGGCTG CTGCCGCTGG TCCTGGCCGC GATGCTGGTC CAGATATCCG AAGGCGGCCT CGACGCCAAA GCGGTGGCCA TGCTCGGCGT CCTGTCGGCG GTCATCGCCG CGGTGCGGCC GTTCGGCGCC GGAACCGCCG GGGTGGAGAC GGTGTTCTTC CTGCTGCTCC TCGCCGGACG GGTCTACGGC CCCGGCTTCG GTTTCGTCCT CGGCAACACC GCGCTGTTCG CCTCGGCGCT GCTGACCGGC GGCGTCGGGC CGTGGCTGCC GTTCCAGATG CTCGGCGCGG CCTTCTTCGC CCTCGGGGCC GGGCTGCTGC CGCGCGCCCG CGGCTGGTGG GAACTCGTCA TGCTGTCCGG ATACGGCGCG GTCGCGAGCC TGGGCTTCGG CCTGATGCTG AACCTGTCGT TCTGGCCGTA CGCGGTCTCC GACGGCTCAC CGCTGTCCTA TGAGGCCGGC GCCTCGGTCG CCGAGAACCT GTCCCGACTG GTCGCGTTCA ACCTGGCCAC CTCGCTGGGC TGGGACATCG GCCGGGCCAT CACCACGACC GTCCTCATCC TCACCTGCGG GCCGGTGCTG CTGCGGGTGT TCCGCCGCGC GGCTCGCAAA GCCCGCTGGC ACAACGAGAC CCGGCCGGTG CCGCGCGTGG CGGAACCGGC CGGGTCGACA GTCTCGCCGT CCTAG
|
Protein sequence | MTTLRLRWGT ALTLTVGGLF GVAAVGWPLL ITPSSHLSEG LTGPWLFAGL LPLVLAAMLV QISEGGLDAK AVAMLGVLSA VIAAVRPFGA GTAGVETVFF LLLLAGRVYG PGFGFVLGNT ALFASALLTG GVGPWLPFQM LGAAFFALGA GLLPRARGWW ELVMLSGYGA VASLGFGLML NLSFWPYAVS DGSPLSYEAG ASVAENLSRL VAFNLATSLG WDIGRAITTT VLILTCGPVL LRVFRRAARK ARWHNETRPV PRVAEPAGST VSPS
|
| |