Gene Snas_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3112 
Symbol 
ID8884311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3284314 
End bp3285138 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511876 
Protein GI291300598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.240687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.181566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC TGCGGCTGCG CTGGGGCACC GCCCTCACCC TGACCGTCGG CGGCCTGTTC 
GGCGTCGCCG CCGTCGGCTG GCCACTGCTG ATCACCCCCT CCTCGCACCT GTCCGAGGGC
CTCACCGGCC CGTGGCTGTT CGCCGGGCTG CTGCCGCTGG TCCTGGCCGC GATGCTGGTC
CAGATATCCG AAGGCGGCCT CGACGCCAAA GCGGTGGCCA TGCTCGGCGT CCTGTCGGCG
GTCATCGCCG CGGTGCGGCC GTTCGGCGCC GGAACCGCCG GGGTGGAGAC GGTGTTCTTC
CTGCTGCTCC TCGCCGGACG GGTCTACGGC CCCGGCTTCG GTTTCGTCCT CGGCAACACC
GCGCTGTTCG CCTCGGCGCT GCTGACCGGC GGCGTCGGGC CGTGGCTGCC GTTCCAGATG
CTCGGCGCGG CCTTCTTCGC CCTCGGGGCC GGGCTGCTGC CGCGCGCCCG CGGCTGGTGG
GAACTCGTCA TGCTGTCCGG ATACGGCGCG GTCGCGAGCC TGGGCTTCGG CCTGATGCTG
AACCTGTCGT TCTGGCCGTA CGCGGTCTCC GACGGCTCAC CGCTGTCCTA TGAGGCCGGC
GCCTCGGTCG CCGAGAACCT GTCCCGACTG GTCGCGTTCA ACCTGGCCAC CTCGCTGGGC
TGGGACATCG GCCGGGCCAT CACCACGACC GTCCTCATCC TCACCTGCGG GCCGGTGCTG
CTGCGGGTGT TCCGCCGCGC GGCTCGCAAA GCCCGCTGGC ACAACGAGAC CCGGCCGGTG
CCGCGCGTGG CGGAACCGGC CGGGTCGACA GTCTCGCCGT CCTAG
 
Protein sequence
MTTLRLRWGT ALTLTVGGLF GVAAVGWPLL ITPSSHLSEG LTGPWLFAGL LPLVLAAMLV 
QISEGGLDAK AVAMLGVLSA VIAAVRPFGA GTAGVETVFF LLLLAGRVYG PGFGFVLGNT
ALFASALLTG GVGPWLPFQM LGAAFFALGA GLLPRARGWW ELVMLSGYGA VASLGFGLML
NLSFWPYAVS DGSPLSYEAG ASVAENLSRL VAFNLATSLG WDIGRAITTT VLILTCGPVL
LRVFRRAARK ARWHNETRPV PRVAEPAGST VSPS